scan=n
seed=1257
noise=0.0
T_CELL:
Av=14.0 Bv=0.25 Tper=100.0 phi_read=0.5 Pi tcfrac=0.5 cycle tauc=3.0
wd=p Cvmin=0.0 Cvmax=0.0 ds_type=n frac_only_p=0.0 frac_only_r=0.0
Tall=6000.0 nspike_max=3000000 ntl=200 determine_phi=f thal_input=p
nw=w Avnw=6.0 Tnw=500.0 Telev=150.0 Tw=350.0
E_CELL: WB model
gNa=100.0 gKdr=40.0 gKz=0.5 gL=0.05 DelgL=0.0 Iext=0.0 DelIext=0.0 fracIext=1.0
Cm=1.0 VNa=55.0 VK=-90.0 VL=-65.0 Vopto=0.0 phi=0.2 gamma=0.0 gamma_for_syn=n
rhd=160.0 Vinc1=-70.0 Vinc2=-65.0
opto: amp=0.0 sig=0.3 freq=0.0
inject_current=n ion_inject=1 Iinject=0.0 tinject=50.0
P_CELL: WB model
gNa=100.0 gKdr=40.0 gKz=0.0 gL=0.1 DelgL=0.0 Iext=0.0 DelIext=0.0 fracIext=1.0
Cm=1.0 VNa=55.0 VK=-90.0 VL=-65.0 Vopto=0.0 phi=0.2 gamma=0.0 gamma_for_syn=n
rhd=15.0 Vinc1=-70.0 Vinc2=-65.0
opto: amp=0.0 sig=0.3 freq=0.0
inject_current=n ion_inject=1 Iinject=0.0 tinject=50.0
SYNAPSE
scalingc=k scaleK=s Kfactor=1.0
Length=10 geom_dim=0 con_shape=g rho_concur=1.0 consider=y
AMPA: ths=-20.0 sigs=2.0 kf=1.0 tAMPA=2.0 Vrev=0.0 ivar=2
NMDA: kx=1.0 tNMDAr=5.0 kf=1.0 tNMDAd=10.0 Vrev=0.0 ivar=4
ths=-20.0 sigs=2.0 thetanp=-50.0 sigmanp=12.5
GABAA: ths=-20.0 sigs=2.0 kt=0.0 kv=0.001 kf=1.0 kr=0.1 tGABAA=3.0 Vrev=-85.0
GABAA_PP: DelVrev_O_DelIext=-4.0
factETPT=1.0 process_time_delay=s
ET: gAMPA=0.6 Vpsp_AMPA=0.0 gNMDA=0.0 Vpsp_NMDA=0.0 Kin=50.0 lam=1.0
ET: UU=0.25 taur=0.0001 tauf=1.0 xic=1.0 tau_delay=1.0 Del_tau_delay=0.0
PT: gAMPA=0.8 Vpsp_AMPA=0.0 gNMDA=0.0 Vpsp_NMDA=0.0 Kin=75.0 lam=1.0
PT: UU=0.25 taur=0.0001 tauf=1.0 xic=1.0 tau_delay=1.0 Del_tau_delay=0.0
EE: gAMPA=0.8 Vpsp_AMPA=0.0 gNMDA=0.0 Vpsp_NMDA=0.0 Kin=200.0 lam=1.0
EE: UU=0.25 taur=0.0001 tauf=1.0 xic=1.0 tau_delay=1.0 Del_tau_delay=0.0
EP: gGABAA=2.8 Vpsp_GABAA=-0.0 Kin=25.0 lam=1.0
EP: UU=0.25 taur=0.0001 tauf=1.0 xic=1.0 tau_delay=0.85 Del_tau_delay=0.0
PE: gAMPA=2.4 Vpsp_AMPA=0.0 gNMDA=0.0 Vpsp_NMDA=0.0 Kin=400.0 lam=1.0
PE: UU=0.25 taur=0.0001 tauf=1.0 xic=1.0 tau_delay=1.0 Del_tau_delay=0.0
PP: gGABAA=2.2 Vpsp_GABAA=-0.0 Kin=25.0 lam=1.0 gel=0.0 Kel=25.0
PP: UU=0.25 taur=0.0001 tauf=1.0 xic=1.0 tau_delay=0.5 Del_tau_delay=0.0
GENERAL
ndeltat=1 deltat=0.05 nt=120000
method=r incond=b fpcal=n smforce=l
T: nwrite=1 nwritear=1
E: nwrite=8 nwritear=1 2 3 4 5 6 7 8
P: nwrite=8 nwritear=1 2 3 4 5 6 7 8
write_aux=n twrite=10 tmcol=100000000.0 tstat=5500.0 traster=50000.0 sp=1
nhist=100 t_touch_interval=25.0
INITIAL CONDITIONS
E
V h n b z
-70.0 0.8 0.2 0.15 0.1
-70.0 0.8 0.2 0.15 0.1
-70.0 0.8 0.2 0.15 0.1
-70.0 0.8 0.2 0.15 0.1
-70.0 0.8 0.2 0.15 0.1
-70.0 0.8 0.2 0.15 0.1
-70.0 0.8 0.2 0.15 0.1
-70.0 0.8 0.2 0.15 0.1
-70.0 0.8 0.2 0.15 0.1
P
V h n a b
-70.0 0.88 0.01 0.25 0.59
-70.0 0.88 0.01 0.25 0.59
-70.0 0.88 0.01 0.25 0.59
-70.0 0.88 0.01 0.25 0.59
-70.0 0.88 0.01 0.25 0.59
-70.0 0.88 0.01 0.25 0.59
-70.0 0.88 0.01 0.25 0.59
-70.0 0.88 0.01 0.25 0.59
-70.0 0.88 0.01 0.25 0.59
scaling : v - according to Vpsp, k - gsyn/sqrt(k)
b - background; g - conductance,
c - presynptic cell number and properties.
inject_current : y - yes, n - no
determine_phi: f - fixed, u - uniformly random.
thal_input: form of thalamic input:
p - Poisson input, a - average conductance.
nw : y - episodes of non-whisking and whisking. n - no episodes,
l - linear transition from non-whisking to whisking.
wd : whisker direction: p - protraction, r - retraction.
ds_type : direction selectivity type:
a - average, u - uniform betweeen Cvmin and Cvmax, n - Cvmin.
scaleK : s - strong synapses, w - weak synapses, n - no scaling of K's
method : r - Runge-Kutta 4, t - Runge-Kutta 2, e - Euler,
o - Runge-Kutta 4 with interaction calculated once,
w - Runge-Kutta 2 with interaction calculated once,
incond : t - from Vin - soma, aux=aux(V), s - from Vin - soma, aux=0,
n - from Vin, soma+dendrite, r - read.
a - random V, axu 0, b - random V, aux=aux(V).
smforce : p - always print (sm=0), n - always no print (sm=1),
l - leave as is.
geom_dim : 0 - no effect of distance, 1 - 1d, 2 - 2d.
con_shape : e - exponential, g - Gaussian.
consider : y - yes, no - no.
process_time_delay: a - all together; s - spread of tau_delay
write_aux : y - write auxiliary variables; n - write only V.