#!/bin/bash

cell=C200897C-P3
IS=0
prop_site=11
#main axon 0 1 2 3 4 5 6 7 8 9 10 11 12 13

# 32,32 too short
# 25,25 too short
# 21,21 too short
# 15,15 too short
# 14,14 too short

# 20,20 too short for Jonas kinetics
# 19,17 too short for Jonas kinetics

for comps in 40,36 34,33 29,27 26,26 24,22 16,16
do
qsub -N vsJ_${cell}_${comps} -l h_rt=24:00:00 -b y x86_64/special -nogui simulation_base.hoc -c "set_generic_arg\(\\\"$cell\\\",$IS,$prop_site,$comps\)" vs-generic_cutoff_Jonas.hoc
done