// UI
objref vBoxCadifusParams
// Inits Calcium parameters.
proc initCaParams() {
DCa_cadifus = 0.15
TBufs_cadifus = 0.07
kfs_cadifus = 1000
KDs_cadifus = 10
TBufm_cadifus = 0.0075
kfm_cadifus = 1000
KDm_cadifus = 0.24
DBufm_cadifus = 0.05
cath_cadifus = 2e-005
gamma_cadifus = 20
vmax_cadifus = 3.75e-006
Kp_cadifus = 0.00027
jmax_cadifus = 0.0035
caer_cadifus = 0.4
Kip3_cadifus = 0.0008
Kact_cadifus = 0.0003
kon_cadifus = 2.7
Kinh_cadifus = 0.0002
vrat_cadifus[0] = 0.239983
}
initCaParams()
// Shows Calcium parameters list.
proc showCaParameters() {
vBoxCadifusParams = new VBox()
vBoxCadifusParams.intercept(1)
{
xpanel("")
xlabel("Diffusion coefficient (um2/ms)")
xvalue("DCa, (um2/ms)","DCa_cadifus", 1,"", 0, 0 )
xlabel("Total concentration of endogeneous Ca buffer (mM)")
xvalue("Ca Buffer, (mM)","TBufs_cadifus", 1,"", 0, 0 )
xlabel("Kf of endogeneous buffer")
xvalue("k_fs, (/mM-ms)","kfs_cadifus", 1,"", 0, 0 )
xlabel("KD of endogeneous buffer")
xvalue("KD steady, (/ms)","KDs_cadifus", 1,"", 0, 0 )
xlabel("Total concentration of mobile/added Ca buffer")
xvalue("TBufm, (mM)","TBufm_cadifus", 1,"", 0, 0 )
xlabel("Kf of mobile/added buffer")
xvalue("kfm, (/mM-ms)","kfm_cadifus", 1,"", 0, 0 )
xlabel("KD of mobile/added buffer")
xvalue("KDm, (/ms)","KDm_cadifus", 1,"", 0, 0 )
xlabel("Diffusion coefficient of mobile buffer")
xvalue("Diffusion Buffer mobile, (um2/ms)","DBufm_cadifus", 1,"", 0, 0 )
xlabel("Threshold for Ca pump activity")
xvalue("Ca threshold, (mM)","cath_cadifus", 1,"", 0, 0 )
xlabel("Ca pump flux density")
xvalue("Gamma, (um/s)","gamma_cadifus", 1,"", 0, 0 )
xlabel("Maximum flux of Ca pump")
xvalue("Vmax, (mM/ms)","vmax_cadifus", 1,"", 0, 0 )
xlabel("Parameter of Ca sensivity of Ca pump")
xvalue("Kp, (mM)","Kp_cadifus", 1,"", 0, 0 )
xlabel("Maximum Ca flux of SERCA channel")
xvalue("jmax, (mM/ms)","jmax_cadifus", 1,"", 0, 0 )
xlabel("Ca reverse concentration of ER")
xvalue("CaER, (mM)","caer_cadifus", 1,"", 0, 0 )
xlabel("Concentration of Ip3 which generates half flux of Ca")
xvalue("Kip3, (mM)","Kip3_cadifus", 1,"", 0, 0 )
xlabel("Concentration of Ca which generates half flux of Ca from SERCA channel")
xvalue("Kact, (mM)","Kact_cadifus", 1,"", 0, 0 )
xlabel("Open kinetic parameter of SERCA channel")
xvalue("kon, (/mM-ms)","kon_cadifus", 1,"", 0, 0 )
xlabel("Close kinetic parameter of SERCA channel")
xvalue("Kinh, (mM)","Kinh_cadifus", 1,"", 0, 0 )
//xlabel("Dimensionless numeric value of vrat[i] equals the volume")
// xlabel("of annulus i of a 1um diameter cylinder multiplied by diam^2")
// xlabel("to get volume per um length")
// xvalue("vrat_cadifus[0]","vrat_cadifus[0]", 0,"", 0, 1 )
xlabel("-------------------------------------------------------------------------------------------------------------------")
xpanel()
}
vBoxCadifusParams.intercept(0)
vBoxCadifusParams.map("cadifus (Globals)", 1647, 102, 360, 800)
}