load_file("CalciumParameters.hoc")
// UI
objref vBoxCaWave, plotShapeCaWaveCai, graphCaWaveCai
// Sets initial UI and simulation params.
proc initParamsCaWave() {
TimeDelayCaWave = 1000
InitIp3 = 0.05
}
// Shows Calcium Wave UI.
proc showCaWaveUi() {
vBoxCaWave = new VBox()
vBoxCaWave.intercept(1)
{
xpanel("")
xlabel("=========== Parameters of waves===========")
xvalue("IP3 increase onset (ms)","TimeDelayCaWave", 1,"", 0, 1)
xvalue("IP3 peak concentration (mM)","InitIp3", 1,"", 0, 1 )
xlabel("=========================================")
xvalue("Run time","tstop", 1,"", 0, 1 )
xbutton("Run simulation", "run()")
xpanel()
}
vBoxCaWave.intercept(0)
vBoxCaWave.map("Ca wave", 283, 102, 235, 133)
removeIfExists(graphList[0], graphCaWaveCai)
graphCaWaveCai = new Graph(0)
addplot(graphCaWaveCai, 0)
graphCaWaveCai.erase_all()
graphCaWaveCai.size(0,50000,0,0.0001)
graphCaWaveCai.view(0, 0, 50000, 0.0001, 602, 705, 400, 200)
graphCaWaveCai.addvar("soma.cai(0.5)",1,1,0.6, 0.9,2)
graphCaWaveCai.fastflush()
removeIfExists(fast_flush_list, plotShapeCaWaveCai)
plotShapeCaWaveCai = new PlotShape(0)
fast_flush_list.append(plotShapeCaWaveCai)
plotShapeCaWaveCai.size(-50,50,-50,50)
plotShapeCaWaveCai.view(-50, -49.9003, 100, 100, 601, 102, 400.64, 400.32)
plotShapeCaWaveCai.exec_menu("Shape Plot")
plotShapeCaWaveCai.variable("cai")
plotShapeCaWaveCai.label(0.12, 0.95, "[Ca2+]i (mM)", 2, 1, 0, 1, 1)
plotShapeCaWaveCai.show(0)
plotShapeCaWaveCai.scale(0,0.0006) // mV, scale of voltage on 3D plots
}
// Opens Calcium Wave window.
proc CalciumWave() {
initParamsCaWave()
showCaWaveUi()
// The set of parameters of Ca stimulations
showCaParameters()
}