// Basic Neural Simulation Framework (BSNF)
//
// Copyright 2007 John L Baker. All rights reserved.
//
// This software is provided AS IS under the terms of the Open Source
// MIT License. See http://www.opensource.org/licenses/mit-license.php.
//
// File: test_baker_320.cpp
//
// Release: 1.0.0
// Author: John Baker
// Updated: 14 July 2006
//
// Description:
//
// Test synaptic plasticity for different types of synapses.
// This tests frequency dependencies in long term plasticity.
#include "test_baker_300.h"
#include "plasticity_glu_baker_2003.h"
using namespace std;
using namespace BNSF;
using namespace UOM;
using namespace BAKER_2003;
void test_baker_320()
{
cout<<"Test case 320 - Frequency dependent plasticity"<<endl;
// Test parameters (change values as needed)
SimTime deltat = -10*msec;
Number freq = 50*Hz;
Number ach = 0*microM;
SimTime tinj,t;
Number Iinj;
int k,n,nspike;
Controller cont;
SSRMNeuron preNeuron;
Test300Neuron postNeuron;
AxonProcess* axon = preNeuron.axonProcess();
SSRMSoma* soma = postNeuron.soma();
NR2A_SynapticResp dummyNMDAR; // needed to get ndmar params
NMDARDepPlasticityRule* rule;
ExternalSpikeRecorder spikeRecorder ("test-baker-spikes.txt");
// Set a temperature to report on
IonChannel::defaultTempC(37);
// Disable presynaptic plasticity for this test
soma->ampa()->presynapticRule( NULL );
// Set the postsynaptic rule to test
soma->ampa()->postsynapticRule(rule=new CA3_AC_STDPRule(&dummyNMDAR));
// Set the AChLevel for the synapse (do this after rules set)
dummyNMDAR.AChLevel(ach);
soma->ampa()->setModParam("AChModulator",ach);
postNeuron.numericIdentifier(1);
preNeuron.numericIdentifier(2);
preNeuron.addProbe(&spikeRecorder);
postNeuron.addProbe(&spikeRecorder);
preNeuron.addToController(&cont);
postNeuron.addToController(&cont);
cont.start();
Synapse* syn = soma->ampa()->createSynapse(axon,1.0f);
Iinj = 0.5*nanoA;
tinj = 0.5*msec;
nspike = 5*20;
cout<<"ACh (microM) = "<<ach/microM<<endl;
cout<<"Delta T (msec) = "<<deltat/msec<<endl;
cout<<"Frequency (Hz) = "<<freq<<endl;
cout<<"Starting synapse weight = "<<soma->ampa()->synapseWeight(syn)<<endl;
for (t=0,n=0; n<nspike;t+=3*sec) {
for (k=0;k<5;k++,n++) {
cont.runUpTo(t+k*sec/freq);
if (deltat>0) {
preNeuron.soma()->Iinjected(Iinj);
cont.runForDuration(tinj);
preNeuron.soma()->Iinjected(0);
cont.runUpTo(t+k*sec/freq+deltat);
postNeuron.soma()->Iinjected(Iinj);
cont.runForDuration(tinj);
postNeuron.soma()->Iinjected(0);
}
else {
postNeuron.soma()->Iinjected(Iinj);
cont.runForDuration(tinj);
postNeuron.soma()->Iinjected(0);
cont.runUpTo(t+k*sec/freq-deltat);
preNeuron.soma()->Iinjected(Iinj);
cont.runForDuration(tinj);
preNeuron.soma()->Iinjected(0);
}
}
cout<<"t = "<<t/sec
<<" (sec), synapse weight = "<<soma->ampa()->synapseWeight(syn)
<<" target weight = "<<rule->targetWeight(syn)<<endl;
}
cout<<"Ending synapse weight (+ 0sec) = "<<soma->ampa()->synapseWeight(syn)<<endl;
cont.runForDuration(10*sec);
cout<<"Ending synapse weight (+10sec) = "<<soma->ampa()->synapseWeight(syn)<<endl;
cont.runForDuration(10*sec);
cout<<"Ending synapse weight (+20sec) = "<<soma->ampa()->synapseWeight(syn)<<endl;
cont.runForDuration(10*sec);
cout<<"Ending synapse weight (+30sec) = "<<soma->ampa()->synapseWeight(syn)<<endl;
cont.finish();
}