COMMENT
Capsaicin point_process puff (Barkai et al. 2020, Goldstein et al. 2019)
ENDCOMMENT
COMMENT
an synaptic current with alpha function conductance defined by
i = g * (v - e) i(nanoamps), g(microsiemens);
where
g = 0 for t < onset and
g = gmax * (t - onset)/tau * exp(-(t - onset - tau)/tau)
for t > onset
this has the property that the maximum value is gmax and occurs at
t = delay + tau.
ENDCOMMENT
COMMENT
A Puff pipette Current for Capsaicin
i = g * (v - e) i(nanoamps), g(microsiemens);
where
g = 0 for t < onset and
g = gmax *Con(X)* alpha*beta* for t > onset
Alpha, Beta are the current open and close kinetics
Conc(X) is the logarthimic dose response curve 'gate', where X is the real concentration (not in logarithmic values)
ENDCOMMENT
NEURON {
POINT_PROCESS Caps_Puff
RANGE onset, tau_act, tau_inact, gmax,X, i, pump
NONSPECIFIC_CURRENT i
}
UNITS {
(nA) = (nanoamp)
(mV) = (millivolt)
(uS) = (microsiemens)
}
PARAMETER {
onset=100 (ms)
tau_act=1e6 (ms) <1e-3,1e10>
tau_inact=6500 (ms) <1e-3,1e10> :500
gmax=9 (uS) <0,1e9>
X=1e-6 (M) <1e-15, 1>
pump=500
A1=-0.00717
A2=1.00092
x0=-7.32034
dx=0.18614
}
ASSIGNED { i (nA) g (uS)}
BREAKPOINT {
if (t<onset) {i=0}
if (gmax) { at_time(onset) }
if(t>=onset && t<onset+pump) {
g = gmax *Conc(X)*alpha( (t - onset)/tau_act)
i = -g
}
at_time(onset+pump)
if(t>=onset+pump) {
g = gmax *Conc(X)*alpha( (pump)/tau_act) *beta((t - onset-pump)/tau_inact)
i = -g
}
}
FUNCTION alpha(x) {
if (x < 0 || x > 10) {
alpha = 0
}else{
alpha = (1-exp(-x))
}
}
FUNCTION beta(x) {
if (x < 0 || x > 10) {
beta = 0
}else{
beta =exp(-x)
}
}
FUNCTION Conc(x) { :Concentration 'gate'
:Capsaicin dose-response curve, Boltzmann function fit according to Senning E,Gordon S et al. eLife 2015.
:Note that the dose response curve accepts the concentration in Molars and
Conc = A2 + (A1-A2)/(1 + exp((log10(x)-x0)/dx))
}