// protodefs.g - Definition of prototype elements for Tutorial #5 /* file for standard compartments */ include compartments // include the definitions for the functions to create H-H channels include P6RSbchanpk.g /* hhchan.g assigns values to the global variables EREST_ACT, ENA, EK, and SOMA_A. The first three will be superseded by values defined below. The value of SOMA_A is not relevant, as the cell reader calculates the compartment area. */ EREST_ACT = -0.07 // resting membrane potential (volts) ENAP6RSb = 0.050 // sodium equilibrium potential EKP6RSb = -0.095 // potassium equilibrium potential ECAP6RSb = 0.125 // calcium equilibrium potential EARP6RSb = -0.035 // anomalous rectifier reversal /* file for synaptic channels */ include synchansP6RSb /* file which makes a spike generator */ include protospikeP6RSb // Make a "library element" to hold the prototypes which will be used // by the cell reader to add compartments and channels to the cell. create neutral /library // We don't want the library to try to calculate anything, so we disable it disable /library // To ensure that all subsequent elements are made in the library pushe /library // Make a prototype compartment. The internal fields will be set by // the cell reader, so they do not need to be set here. make_cylind_compartment /* makes "compartment" */ // Create the Traub Na(F) fast transient sodium channel make_NaF12 // Create the Traub Na(P) persistent noninactivating sodium channel make_NaP12 // Create the Traub K(DR) delayed rectifier potassium channel make_KDR12 // Create the Traub K(A) transient potassium channel make_KA12 // Create the Traub K2 slow activating/inactivating potassium channel make_K212 // Create the Traub M muscarinic receptor supressed potassium channel make_KM12 // Create the Traub low threshold transient Ca channel make_CaL12 // Create the Traub high threshold transient Ca channel make_CaH12 // Create a Ca_concen element using the above Ca currents make_Ca_s12 make_Ca_d12 // Create the Traub calcium dependent K channel make_KCs12 make_KCd12 // Create the Traub calcium dependent K-AHP channel make_KAHPs12 make_KAHPd12 // Create the Traub anomalous rectifier channel make_AR12 //make_spk12 /* Make a spike generator element "spike"*/ pope