//%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% // // NOTICE OF COPYRIGHT AND OWNERSHIP OF SOFTWARE // // Copyright 2007, The University Of Pennsylvania // School of Engineering & Applied Science. // All rights reserved. // For research use only; commercial use prohibited. // Distribution without permission of Maciej T. Lazarewicz not permitted. // mlazarew@seas.upenn.edu // //%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% // Kopell, TABLE 2 // preCell, postCell, synName, tao1, tao2, Erev, modFileName, synLocSec, synLoc, Npre, gmax, gmaxUnits, delay, r // gmaxUnits 0-mS, 1-mS/cm2 //table 1 says Goe 5, Gie 5, Goi 0.1, Gii 0.3, Gi0 0.8, Geo 1, Gei 0.4, //table 2 says 10, 5, 0.1, 0.2, 0.8, 0.3, 0.1. Both also have diff Iapp // IE the paper says this should be 0.7, 9.1 not 1.5 8.0, and why is ### the locsec -1? //pre,post,synName,tao1,tao2, Erev, modFileName, synLocSec, synLoc,Npre, gmax, gmaxUnits, delay, r Bask, Pyr, GABA, 1.5, 8.0, -80, Exp2Syn, 0, 0.5, -1, 5.5, 0, 1.5, -1 // II Bask, Bask, GABA, 1.5, 8.0, -80, Exp2Syn, 0, 0.5, 1, 0.5, 1, 1.5, -1 // EI 7/27/09 change was to change the r below from 0 to different levels up to 0.5, most between 0 to 0.1 Pyr, Bask, NMDA, 25, 250, 0, Exp2SynNMDA, 0, 0.5, 10, 0.5, 1, 1.5, 0 //OE OLM, Pyr, GABA, 0.2, 20, -80, Exp2Syn, 3, 0.5, 0, 0.0, 0, 2, -1 // OI OLM, Bask, GABA, 0.2, 20, -80, Exp2Syn, 0, 0.5, 0, 0.0, 1, 0.1, -1 // IO Bask, OLM, GABA, 1.5, 8.0, -80, Exp2Syn, 0, 0.5, 0, 3.5, 1, 0.1, -1 // EO Pyr, OLM, NMDA, 5, 100, 0, Exp2SynNMDA, 0, 0.5, 0, 2.1, 1, 0.1, 1 //Pyr, Bask, AMPA, 0.05, 5.3, 0, Exp2Syn, 0, 0.5, 40, 0, 1, 0.1, -1 //Pyr, OLM, AMPA, 0.05, 5.3, 0, Exp2Syn, 0, 0.5, 40, 0, 1, 0.1, -1 Noise, Pyr, AMPA, 0.05, 5.3, 0, Exp2Syn, 1, 0.5, 1, 0.1, 1, 0.1, -1 // I had originally placed the gmax at 5.5 like the bask to pyr, and it gave 10 ms long response. Now I have // switched it to 0.4 like EI, but this was arbitrary. It makes AP every time. // so now I've switched it to 0.01 Noise, Bask, AMPA, 0.05, 5.3, 0, Exp2Syn, 0, 0.5, 1, 0.1, 1, 0.1, -1 //for this last one, it is a signal from elsewhere, synapsing on A1, with high signal strength //it is also used for rec synapses, ####but maybe the delay should be tweaked (0.1 too fast?) Pyr, Pyr, AMPA, 0.05, 5.3, 0, Exp2Syn, 1, 0.5, 1, 0.1, 1, 0.1, -1 //The above line is the normal line for recurrent axons for conn.dat type 9. Note the gmax is VERY low //the below line is manyconn_AMPA.dat with smaller basket-pyr conns on A3 as antennae //Bask, Pyr, AMPA, 0.05, 5.3, 0, Exp2Syn, 3, 0.5, 1, 0.01, 1, 0.1, -1 //for these gap junctions, the only items of interest are the synLocSec and gmax. as of 6/08 the LocSec is not implemented //it would take some tweaking to use it, as the synparamset is not freely accessible during the connectnetwork() Bask, Bask, gap, 0, 0, 0, Exp2Syn, 0, 0.5, 1, 0.0001, 1, 0.1, -1 //for bask, .0001 is tight coupling, .00001 is very loose Can also use this as a second type of gaps, like linear gaps in Drivers // and next one for gaps from Drivers to neighbors Pyr, Pyr, gap, 0, 0, 0, Exp2Syn, 1, 0.5, 1, 0.01, 1, 0.1, -1 //for pyr, .01 is high coupling, .001 is very low