from neuron import h
from stellate import Stellate
import numpy as np
import multiprocessing
cell = Stellate()
h.load_file("parcom.hoc")
p = h.ParallelComputeTool()
p.change_nthread(2,1)
p.multisplit(1)
h('load_file("vm.ses")')
h.nrncontrolmenu()
stimdata = dict()
stimdata['timeglobal'] = 8000
synapsesdata = dict()
cell.createsyn()
freq_interv = [5, 10, 20, 50, 100, 250]
for ms_step in freq_interv:
spk_stim_mossy = []
spk_nc_pfsyn = []
spk_nc_pfsyn_nmda = []
spk_stim = h.NetStim()
spk_stim.interval = ms_step
spk_stim.number = 10
spk_stim.noise = 0
spk_stim.start = 3000
spk_stim_mossy.append(spk_stim)
for m in range(int(len(spk_stim_mossy))):
spk_nc_pfsyn.append([h.NetCon(spk_stim_mossy[m],pf_sc.input,0,0.1,1) for pf_sc in cell.pfsc])
spk_nc_pfsyn_nmda.append([h.NetCon(spk_stim_mossy[m],pfnmda.input,0,0.1,1) for pfnmda in cell.pf_scnmda])
fixed_time = h.CVode()
fixed_time.active(0)
h.dt = 0.025
h.celsius = 32 #37
h.tstop = stimdata['timeglobal']
h.v_init = -60
def initialize():
h.finitialize()
h.run()
initialize()
np.savetxt('05_singlesynAMPA_Hz_' + str(int(1000/ms_step)) + '.txt', np.column_stack((np.array(cell.time),np.array(cell.pfsc[0].i['AMPA'][0]))), delimiter = ' ')
np.savetxt('05_singlesynNMDA_Hz_' + str(int(1000/ms_step)) + '.txt', np.column_stack((np.array(cell.time),np.array(cell.pf_scnmda[0].i['NMDA'][0]))), delimiter = ' ')
np.savetxt('05_voltagetraceAMPA-NMDA_Hz_' + str(int(1000/ms_step)) + '.txt', np.column_stack((np.array(cell.time),np.array(cell.voltage))), delimiter = ' ')