// genesis
// Setting the axonal propagation velocity
float CABLE_VEL = 1 // scale factor = 1/(cable velocity) sec/meter
float destlim = {I23LTS_P5RSa_destlim}
/*
* Usage :
* planarconnect source-path destination-path
* [-relative]
* [-sourcemask {box,ellipse} x1 y1 x2 y2]
* [-sourcehole {box,ellipse} x1 y1 x2 y2]
* [-destmask {box,ellipse} x1 y1 x2 y2]
* [-desthole {box,ellipse} x1 y1 x2 y2]
* [-probability p]
*/
//I23LTS - P5RSa GABAa
str s
//Load synapse location array
str locations = "apdend4 apdend5 apdend6 apdend7 apdend8 apdend9 apdend10 apdend11 apdend12 apdend13 apdend14aR apdend14bR apdend14cR apdend14dR apdend14aL apdend14bL apdend14cL apdend14dL apobdistLb apobdistLc apobmidLb apobmidLc apobproxLb apobproxLc apobdistRb apobdistRc apobmidRb apobmidRc apobproxRb apobproxRc basalLsuperb basalLsuperc basalLmidb basalLmidc basalRsuperb basalRsuperc basalRmidb basalRmidc basaldeepb basaldeepc"
foreach s ({arglist {locations}})
barrierall //ayu
rvolumeconnect /I23LTSnet/I23LTS[]/soma/spk18 \
/P5RSanet/P5RSa[]/{s}/Inh_ch23I23LTSGABAa@{regionnodes} \
-relative \
-sourcemask box -1 -1 -1 1 1 1 \
-destmask box -{destlim} -{destlim} -1 {destlim} {destlim} 1 \
-desthole box -0.000001 -0.000001 -0.000001 0.000001 0.000001 0.000001 \
-probability {{shortrangeprobscale}*{I23LTS_P5RSa_prob}}
end
// assigning delays using the planardelay function
/*
* Usage :
* planardelay path
* [-fixed delay]
* [-radial propagation_velocity]
* [-uniform range] (not used here)
* [-gaussian sd max] (not used here)
* [-exp mid max] (not used here)
* [-absoluterandom] (not used here)
*/
barrierall //ayu
rvolumedelay /I23LTSnet/I23LTS[]/soma/spk18 -radial {I23LTS_P5RSa_axdelayCV} -add
//I23LTS - P5RSa GABAa
str s
//Load synapse location array
str locations = "apdend4 apdend5 apdend6 apdend7 apdend8 apdend9 apdend10 apdend11 apdend12 apdend13 apdend14aR apdend14bR apdend14cR apdend14dR apdend14aL apdend14bL apdend14cL apdend14dL apobdistLb apobdistLc apobmidLb apobmidLc apobproxLb apobproxLc apobdistRb apobdistRc apobmidRb apobmidRc apobproxRb apobproxRc basalLsuperb basalLsuperc basalLmidb basalLmidc basalRsuperb basalRsuperc basalRmidb basalRmidc basaldeepb basaldeepc"
foreach s ({arglist {locations}})
barrierall //ayu
syndelay /P5RSanet/P5RSa[]/{s}/Inh_ch23I23LTSGABAa {I23LTS_P5RSa_syndelay} -add
end
// assigning weights using the planarweight function
/*
* Usage :
* planarweight sourcepath
* [-fixed weight]
* [-decay decay_rate max_weight min_weight]
* [-uniform range]
* [-gaussian sd max]
* [-exponential mid max]
* [-absoluterandom]
*/
barrierall //ayu
rvolumeweight /I23LTSnet/I23LTS[]/soma/spk18 -decay {I23LTSdecayrate} {I23LTSmaxwgt} {I23LTSminwgt}