// genesis
// Setting the axonal propagation velocity
float CABLE_VEL = 1 // scale factor = 1/(cable velocity) sec/meter
float destlim = {I5LTS_P6RSd_destlim}
/*
* Usage :
* volumeconnect source-path destination-path
* [-relative]
* [-sourcemask {box,ellipse} x1 y1 x2 y2]
* [-sourcehole {box,ellipse} x1 y1 x2 y2]
* [-destmask {box,ellipse} x1 y1 x2 y2]
* [-desthole {box,ellipse} x1 y1 x2 y2]
* [-probability p]
*/
//I5LTS - P6RSd GABAa
str s
//Load synapse location array
str locations = "apdend4 apdend5 apdend6 apdend7 apdend8 apdend9 apdend10 apobdistLb apobdistLc apobmidLb apobmidLc apobproxLb apobproxLc apobdistRb apobdistRc apobmidRb apobmidRc apobproxRb apobproxRc basalLsuperb basalLsuperc basalLmidb basalLmidc basalRsuperb basalRsuperc basalRmidb basalRmidc basaldeepb basaldeepc"
foreach s ({arglist {locations}})
barrierall //ayu
rvolumeconnect /I5LTSnet/I5LTS[]/soma/spk19 \
/P6RSdnet/P6RSd[]/{s}/Inh_ch14I5LTSGABAa@{regionnodes} \
-relative \
-sourcemask box -1 -1 -1 1 1 1 \
-destmask box -{destlim} -{destlim} -1 {destlim} {destlim} 1 \
-desthole box -0.000001 -0.000001 -0.000001 0.000001 0.000001 0.000001 \
-probability {{shortrangeprobscale}*{I5LTS_P6RSd_prob}}
end
// assigning delays using the volumedelay function
/*
* Usage :
* volumedelay path
* [-fixed delay]
* [-radial propagation_velocity]
* [-uniform range] (not used here)
* [-gaussian sd max] (not used here)
* [-exp mid max] (not used here)
* [-absoluterandom] (not used here)
*/
barrierall //ayu
rvolumedelay /I5LTSnet/I5LTS[]/soma/spk19 -radial {I5LTS_P6RSd_axdelayCV} -add
//I5LTS - P6RSd GABAa
str s
//Load synapse location array
str locations = "apdend4 apdend5 apdend6 apdend7 apdend8 apdend9 apdend10 apobdistLb apobdistLc apobmidLb apobmidLc apobproxLb apobproxLc apobdistRb apobdistRc apobmidRb apobmidRc apobproxRb apobproxRc basalLsuperb basalLsuperc basalLmidb basalLmidc basalRsuperb basalRsuperc basalRmidb basalRmidc basaldeepb basaldeepc"
foreach s ({arglist {locations}})
barrierall //ayu
syndelay /P6RSdnet/P6RSd[]/{s}/Inh_ch14I5LTSGABAa {I5LTS_P6RSd_syndelay} -add
end
// assigning weights using the volumeweight function
/*
* Usage :
* volumeweight sourcepath
* [-fixed weight]
* [-decay decay_rate max_weight min_weight]
* [-uniform range]
* [-gaussian sd max]
* [-exponential mid max]
* [-absoluterandom]
*/
barrierall //ayu
rvolumeweight /I5LTSnet/I5LTS[]/soma/spk19 -decay {I5LTSdecayrate} {I5LTSmaxwgt} {I5LTSminwgt}