// genesis
// Setting the axonal propagation velocity
float CABLE_VEL = 1 // scale factor = 1/(cable velocity) sec/meter
float destlim = {P5IBb_C23FS_destlim}
/*
* Usage :
* volumeconnect source-path destination-path
* [-relative]
* [-sourcemask {box,ellipse} x1 y1 x2 y2]
* [-sourcehole {box,ellipse} x1 y1 x2 y2]
* [-destmask {box,ellipse} x1 y1 x2 y2]
* [-desthole {box,ellipse} x1 y1 x2 y2]
* [-probability p]
*/
//P5IBb - C23FS AMPA
str s
//Load synapse location array
str locations = "distdendNlongb distdendNlongc distdendNmidb distdendNmidc distdendNshorta distdendNshortb distdendElongb distdendElongc distdendEmidb distdendEmidc distdendEshorta distdendEshortb distdendSlongb distdendSlongc distdendSmidb distdendSmidc distdendSshorta distdendSshortb distdendWlongb distdendWlongc distdendWmidb distdendWmidc distdendWshorta distdendWshortb"
foreach s ({arglist {locations}})
barrierall //ayu
rvolumeconnect /P5IBbnet/P5IBb[]/soma/spk7 \
/C23FSnet/C23FS[]/{s}/Ex_ch15P5IBAMPA@{regionnodes} \
-relative \
-sourcemask box -1 -1 -1 1 1 1 \
-destmask box -{destlim} -{destlim} -1 {destlim} {destlim} 1 \
-desthole box -0.000001 -0.000001 -0.000001 0.000001 0.000001 0.000001 \
-probability {{shortrangeprobscale}*{P5IBb_C23FS_prob}}
end
//P5IBb - C23FS NMDA
str s
//Load synapse location array
str locations = "distdendNlongb distdendNlongc distdendNmidb distdendNmidc distdendNshorta distdendNshortb distdendElongb distdendElongc distdendEmidb distdendEmidc distdendEshorta distdendEshortb distdendSlongb distdendSlongc distdendSmidb distdendSmidc distdendSshorta distdendSshortb distdendWlongb distdendWlongc distdendWmidb distdendWmidc distdendWshorta distdendWshortb"
foreach s ({arglist {locations}})
barrierall //ayu
rvolumeconnect /P5IBbnet/P5IBb[]/soma/spk7 \
/C23FSnet/C23FS[]/{s}/Ex_ch15P5IBNMDA@{regionnodes} \
-relative \
-sourcemask box -1 -1 -1 1 1 1 \
-destmask box -{destlim} -{destlim} -1 {destlim} {destlim} 1 \
-desthole box -0.000001 -0.000001 -0.000001 0.000001 0.000001 0.000001 \
-probability {{shortrangeprobscale}*{P5IBb_C23FS_prob}}
end
// assigning delays using the volumedelay function
/*
* Usage :
* volumedelay path
* [-fixed delay]
* [-radial propagation_velocity]
* [-uniform range] (not used here)
* [-gaussian sd max] (not used here)
* [-exp mid max] (not used here)
* [-absoluterandom] (not used here)
*/
barrierall //ayu
rvolumedelay /P5IBbnet/P5IBb[]/soma/spk7 -radial {P5IBb_C23FS_axdelayCV} -add
// P5IBb - C23FS AMPA
str s
//Load synapse location array
str locations = "distdendNlongb distdendNlongc distdendNmidb distdendNmidc distdendNshorta distdendNshortb distdendElongb distdendElongc distdendEmidb distdendEmidc distdendEshorta distdendEshortb distdendSlongb distdendSlongc distdendSmidb distdendSmidc distdendSshorta distdendSshortb distdendWlongb distdendWlongc distdendWmidb distdendWmidc distdendWshorta distdendWshortb"
foreach s ({arglist {locations}})
barrierall //ayu
syndelay /C23FSnet/C23FS[]/{s}/Ex_ch15P5IBAMPA {P5IBb_C23FS_syndelay} -add
end
// P5IBb - C23FS NMDA
str s
//Load synapse location array
str locations = "distdendNlongb distdendNlongc distdendNmidb distdendNmidc distdendNshorta distdendNshortb distdendElongb distdendElongc distdendEmidb distdendEmidc distdendEshorta distdendEshortb distdendSlongb distdendSlongc distdendSmidb distdendSmidc distdendSshorta distdendSshortb distdendWlongb distdendWlongc distdendWmidb distdendWmidc distdendWshorta distdendWshortb"
foreach s ({arglist {locations}})
barrierall //ayu
syndelay /C23FSnet/C23FS[]/{s}/Ex_ch15P5IBNMDA {P5IBb_C23FS_syndelay} -add
end
// assigning weights using the volumeweight function
/*
* Usage :
* volumeweight sourcepath
* [-fixed weight]
* [-decay decay_rate max_weight min_weight]
* [-uniform range]
* [-gaussian sd max]
* [-exponential mid max]
* [-absoluterandom]
*/
barrierall //ayu
rvolumeweight /P5IBbnet/P5IBb[]/soma/spk7 -decay {P5IBdecayrate} {P5IBmaxwgt} {P5IBminwgt}
//volumeweight /P5IBanet/P5IBa[]/soma/spk6 -fixed 0.50