// genesis // Setting the axonal propagation velocity float CABLE_VEL = 1 // scale factor = 1/(cable velocity) sec/meter float destlim = {ST4RS_I23LTS_destlim} /* * Usage : * volumeconnect source-path destination-path * [-relative] * [-sourcemask {box,ellipse} x1 y1 x2 y2] * [-sourcehole {box,ellipse} x1 y1 x2 y2] * [-destmask {box,ellipse} x1 y1 x2 y2] * [-desthole {box,ellipse} x1 y1 x2 y2] * [-probability p] */ //ST4RS - I23LTS AMPA str s //Load synapse location array str locations = "distdendNlongb distdendNlongc distdendNmidb distdendNmidc distdendNshorta distdendNshortb distdendElongb distdendElongc distdendEmidb distdendEmidc distdendEshorta distdendEshortb distdendSlongb distdendSlongc distdendSmidb distdendSmidc distdendSshorta distdendSshortb distdendWlongb distdendWlongc distdendWmidb distdendWmidc distdendWshorta distdendWshortb" foreach s ({arglist {locations}}) barrierall //ayu rvolumeconnect /ST4RSnet/ST4RS[]/soma/spk17 \ /I23LTSnet/I23LTS[]/{s}/Ex_ch18ST4RSAMPA@{regionnodes} \ -relative \ -sourcemask box -1 -1 -1 1 1 1 \ -destmask box -{destlim} -{destlim} -1 {destlim} {destlim} 1 \ -desthole box -0.000001 -0.000001 -0.000001 0.000001 0.000001 0.000001 \ -probability {{shortrangeprobscale}*{ST4RS_I23LTS_prob}} end //ST4RS - I23LTS NMDA str s //Load synapse location array str locations = "distdendNlongb distdendNlongc distdendNmidb distdendNmidc distdendNshorta distdendNshortb distdendElongb distdendElongc distdendEmidb distdendEmidc distdendEshorta distdendEshortb distdendSlongb distdendSlongc distdendSmidb distdendSmidc distdendSshorta distdendSshortb distdendWlongb distdendWlongc distdendWmidb distdendWmidc distdendWshorta distdendWshortb" foreach s ({arglist {locations}}) barrierall //ayu rvolumeconnect /ST4RSnet/ST4RS[]/soma/spk17 \ /I23LTSnet/I23LTS[]/{s}/Ex_ch18ST4RSNMDA@{regionnodes} \ -relative \ -sourcemask box -1 -1 -1 1 1 1 \ -destmask box -{destlim} -{destlim} -1 {destlim} {destlim} 1 \ -desthole box -0.000001 -0.000001 -0.000001 0.000001 0.000001 0.000001 \ -probability {{shortrangeprobscale}*{ST4RS_I23LTS_prob}} end // assigning delays using the volumedelay function /* * Usage : * volumedelay path * [-fixed delay] * [-radial propagation_velocity] * [-uniform range] (not used here) * [-gaussian sd max] (not used here) * [-exp mid max] (not used here) * [-absoluterandom] (not used here) */ barrierall //ayu rvolumedelay /ST4RSnet/ST4RS[]/soma/spk17 -radial {ST4RS_I23LTS_axdelayCV} -add // ST4RS - I23LTS AMPA str s //Load synapse location array str locations = "distdendNlongb distdendNlongc distdendNmidb distdendNmidc distdendNshorta distdendNshortb distdendElongb distdendElongc distdendEmidb distdendEmidc distdendEshorta distdendEshortb distdendSlongb distdendSlongc distdendSmidb distdendSmidc distdendSshorta distdendSshortb distdendWlongb distdendWlongc distdendWmidb distdendWmidc distdendWshorta distdendWshortb" foreach s ({arglist {locations}}) barrierall //ayu syndelay /I23LTSnet/I23LTS[]/{s}/Ex_ch18ST4RSAMPA {ST4RS_I23LTS_syndelay} -add end // ST4RS - I23LTS NMDA str s //Load synapse location array str locations = "distdendNlongb distdendNlongc distdendNmidb distdendNmidc distdendNshorta distdendNshortb distdendElongb distdendElongc distdendEmidb distdendEmidc distdendEshorta distdendEshortb distdendSlongb distdendSlongc distdendSmidb distdendSmidc distdendSshorta distdendSshortb distdendWlongb distdendWlongc distdendWmidb distdendWmidc distdendWshorta distdendWshortb" foreach s ({arglist {locations}}) barrierall //ayu syndelay /I23LTSnet/I23LTS[]/{s}/Ex_ch18ST4RSNMDA {ST4RS_I23LTS_syndelay} -add end // assigning weights using the volumeweight function /* * Usage : * volumeweight sourcepath * [-fixed weight] * [-decay decay_rate max_weight min_weight] * [-uniform range] * [-gaussian sd max] * [-exponential mid max] * [-absoluterandom] */ barrierall //ayu rvolumeweight /ST4RSnet/ST4RS[]/soma/spk17 -decay {ST4RSdecayrate} {ST4RSmaxwgt} {ST4RSminwgt}