// genesis // Setting the axonal propagation velocity float CABLE_VEL = 1 // scale factor = 1/(cable velocity) sec/meter float destlim = {TCR_P5IBd_destlim} /* * Usage : * volumeconnect source-path destination-path * [-relative] * [-sourcemask {box,ellipse} x1 y1 x2 y2] * [-sourcehole {box,ellipse} x1 y1 x2 y2] * [-destmask {box,ellipse} x1 y1 x2 y2] * [-desthole {box,ellipse} x1 y1 x2 y2] * [-probability p] */ //TCR - P5IBd AMPA str s //Load synapse location array str locations = "apdend13 apdend14aR apdend14bR apdend14cR apdend14dR apdend14aL apdend14bL apdend14cL apdend14dL" foreach s ({arglist {locations}}) barrierall //ayu rvolumeconnect /TCRnet/TCR[]/soma/spk20 \ /P5IBdnet/P5IBd[]/{s}/Ex_ch9TCRAMPA@{regionnodes} \ -relative \ -sourcemask box -1 -1 -1 1 1 1 \ -destmask box -{destlim} -{destlim} -1 {destlim} {destlim} 1 \ -desthole box -0.000001 -0.000001 -0.000001 0.000001 0.000001 0.000001 \ -probability {{shortrangeprobscale}*{TCR_P5IBd_prob}} end //TCR - P5IBd NMDA str s //Load synapse location array str locations = "apdend13 apdend14aR apdend14bR apdend14cR apdend14dR apdend14aL apdend14bL apdend14cL apdend14dL" foreach s ({arglist {locations}}) barrierall //ayu rvolumeconnect /TCRnet/TCR[]/soma/spk20 \ /P5IBdnet/P5IBd[]/{s}/Ex_ch9TCRNMDA@{regionnodes} \ -relative \ -sourcemask box -1 -1 -1 1 1 1 \ -destmask box -{destlim} -{destlim} -1 {destlim} {destlim} 1 \ -desthole box -0.000001 -0.000001 -0.000001 0.000001 0.000001 0.000001 \ -probability {{shortrangeprobscale}*{TCR_P5IBd_prob}} end // assigning delays using the volumedelay function /* * Usage : * volumedelay path * [-fixed delay] * [-radial propagation_velocity] * [-uniform range] (not used here) * [-gaussian sd max] (not used here) * [-exp mid max] (not used here) * [-absoluterandom] (not used here) */ barrierall //ayu rvolumedelay /TCRnet/TCR[]/soma/spk20 -fixed {TCR_P5IBd_axdelayCV} -add //TCR - P5IBd NMDA str s //Load synapse location array str locations = "apdend13 apdend14aR apdend14bR apdend14cR apdend14dR apdend14aL apdend14bL apdend14cL apdend14dL" foreach s ({arglist {locations}}) barrierall //ayu syndelay /P5IBdnet/P5IBd[]/{s}/Ex_ch9TCRNMDA {TCR_P5IBd_syndelay} -add end //TCR - P5IBd NMDA str s //Load synapse location array str locations = "apdend13 apdend14aR apdend14bR apdend14cR apdend14dR apdend14aL apdend14bL apdend14cL apdend14dL" foreach s ({arglist {locations}}) barrierall //ayu syndelay /P5IBdnet/P5IBd[]/{s}/Ex_ch9TCRAMPA {TCR_P5IBd_syndelay} -add end // assigning weights using the volumeweight function /* * Usage : * volumeweight sourcepath * [-fixed weight] * [-decay decay_rate max_weight min_weight] * [-uniform range] * [-gaussian sd max] * [-exponential mid max] * [-absoluterandom] */ barrierall //ayu rvolumeweight /TCRnet/TCR[]/soma/spk20 -decay {TCRdecayrate} {TCRmaxwgt} {TCRminwgt}