////////////////////////////////////////////////////////////////////////// // // Johannes Hjorth, Mars 2007 // hjorth@nada.kth.se // // fsNeuron.g - Creates fast spiking neurons from p-files // ////////////////////////////////////////////////////////////////////////// // // makeFsNeuron -- Creates the library template for a FS-neuron // copyFsNeuron -- Makes multiple copies of the FS-neuron // // Example: // copyFsNeuron "/fs" 10 // ////////////////////////////////////////////////////////////////////////// function makeFsInhomogeneNeuron(pFile, neuronPath) str pFile str neuronPath echo "Reading from "{pFile}" and creating "{neuronPath} readcell {pFile} {neuronPath} // Number of inputs to each compartmenttype addfield {neuronPath} somaDensityAMPA addfield {neuronPath} somaDensityNMDA addfield {neuronPath} somaDensityGABA addfield {neuronPath} primDensityAMPA addfield {neuronPath} primDensityNMDA addfield {neuronPath} primDensityGABA addfield {neuronPath} secDensityAMPA addfield {neuronPath} secDensityNMDA addfield {neuronPath} secDensityGABA addfield {neuronPath} tertDensityAMPA addfield {neuronPath} tertDensityNMDA addfield {neuronPath} tertDensityGABA // Weights of each input addfield {neuronPath} somaWeightAMPA addfield {neuronPath} somaWeightNMDA addfield {neuronPath} somaWeightGABA addfield {neuronPath} primWeightAMPA addfield {neuronPath} primWeightNMDA addfield {neuronPath} primWeightGABA addfield {neuronPath} secWeightAMPA addfield {neuronPath} secWeightNMDA addfield {neuronPath} secWeightGABA addfield {neuronPath} tertWeightAMPA addfield {neuronPath} tertWeightNMDA addfield {neuronPath} tertWeightGABA // Set default values for densities setfield {neuronPath} somaDensityAMPA 1 setfield {neuronPath} somaDensityNMDA 1 setfield {neuronPath} somaDensityGABA 3 setfield {neuronPath} primDensityAMPA 1 setfield {neuronPath} primDensityNMDA 1 setfield {neuronPath} primDensityGABA 3 setfield {neuronPath} secDensityAMPA 1 setfield {neuronPath} secDensityNMDA 1 setfield {neuronPath} secDensityGABA 3 setfield {neuronPath} tertDensityAMPA 1 setfield {neuronPath} tertDensityNMDA 1 setfield {neuronPath} tertDensityGABA 0 // Set default values for synapse weights setfield {neuronPath} somaWeightAMPA 1.0 setfield {neuronPath} somaWeightNMDA 1.0 setfield {neuronPath} somaWeightGABA 1.0 setfield {neuronPath} primWeightAMPA 1.0 setfield {neuronPath} primWeightNMDA 1.0 setfield {neuronPath} primWeightGABA 1.0 setfield {neuronPath} secWeightAMPA 1.0 setfield {neuronPath} secWeightNMDA 1.0 setfield {neuronPath} secWeightGABA 1.0 setfield {neuronPath} tertWeightAMPA 1.0 setfield {neuronPath} tertWeightNMDA 1.0 setfield {neuronPath} tertWeightGABA 1.0 end