////////////////////////////////////////////////////////////////////////// // // Johannes Hjorth, june 2005 // hjorth@nada.kth.se // // fsNeuron.g - Creates a fast spiking neuron in the library // ////////////////////////////////////////////////////////////////////////// // // makeFsNeuron -- Creates the library template for a FS-neuron // copyFsNeuron -- Makes multiple copies of the FS-neuron // // Example: // copyFsNeuron "/fs" 10 // ////////////////////////////////////////////////////////////////////////// str fsLibraryPath = "/library/fs" ////////////////////////////////////////////////////////////////////////// function makeFsNeuron // readcell fsMorphTEST.p {fsLibraryPath} readcell fsMorphology.p {fsLibraryPath} // Number of inputs to each compartmenttype addfield {fsLibraryPath} somaDensityAMPA addfield {fsLibraryPath} somaDensityNMDA addfield {fsLibraryPath} somaDensityGABA addfield {fsLibraryPath} primDensityAMPA addfield {fsLibraryPath} primDensityNMDA addfield {fsLibraryPath} primDensityGABA addfield {fsLibraryPath} secDensityAMPA addfield {fsLibraryPath} secDensityNMDA addfield {fsLibraryPath} secDensityGABA addfield {fsLibraryPath} tertDensityAMPA addfield {fsLibraryPath} tertDensityNMDA addfield {fsLibraryPath} tertDensityGABA // Weights of each input addfield {fsLibraryPath} somaWeightAMPA addfield {fsLibraryPath} somaWeightNMDA addfield {fsLibraryPath} somaWeightGABA addfield {fsLibraryPath} primWeightAMPA addfield {fsLibraryPath} primWeightNMDA addfield {fsLibraryPath} primWeightGABA addfield {fsLibraryPath} secWeightAMPA addfield {fsLibraryPath} secWeightNMDA addfield {fsLibraryPath} secWeightGABA addfield {fsLibraryPath} tertWeightAMPA addfield {fsLibraryPath} tertWeightNMDA addfield {fsLibraryPath} tertWeightGABA // Set default values for densities setfield {fsLibraryPath} somaDensityAMPA 1 setfield {fsLibraryPath} somaDensityNMDA 1 setfield {fsLibraryPath} somaDensityGABA 3 setfield {fsLibraryPath} primDensityAMPA 1 setfield {fsLibraryPath} primDensityNMDA 1 setfield {fsLibraryPath} primDensityGABA 3 setfield {fsLibraryPath} secDensityAMPA 1 setfield {fsLibraryPath} secDensityNMDA 1 setfield {fsLibraryPath} secDensityGABA 3 setfield {fsLibraryPath} tertDensityAMPA 1 setfield {fsLibraryPath} tertDensityNMDA 1 setfield {fsLibraryPath} tertDensityGABA 0 // Set default values for synapse weights setfield {fsLibraryPath} somaWeightAMPA 1.0 setfield {fsLibraryPath} somaWeightNMDA 1.0 setfield {fsLibraryPath} somaWeightGABA 1.0 setfield {fsLibraryPath} primWeightAMPA 1.0 setfield {fsLibraryPath} primWeightNMDA 1.0 setfield {fsLibraryPath} primWeightGABA 1.0 setfield {fsLibraryPath} secWeightAMPA 1.0 setfield {fsLibraryPath} secWeightNMDA 1.0 setfield {fsLibraryPath} secWeightGABA 1.0 setfield {fsLibraryPath} tertWeightAMPA 1.0 setfield {fsLibraryPath} tertWeightNMDA 1.0 setfield {fsLibraryPath} tertWeightGABA 1.0 end ////////////////////////////////////////////////////////////////////////// function copyFsNeuron(destination, number) str destination int number copy {fsLibraryPath} {destination}[0] -repeat {number} end ////////////////////////////////////////////////////////////////////////// function connectFsNeuron(pre, post) echo "Function not implemented yet. How to specify insynapse?" end