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<RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>C2</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>C3</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>C4</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>O</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>C5</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>I0</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>I1</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>I2</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>I3</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>I4</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>I5</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>I6</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>I7</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> </InitialProbabilities> </SchemeInitialStatesProbabilities> </SchemeCollection> </InitialProbabilities> <Variables> <VariableList> <VariableAndProtocol> <Name>Voltage</Name> <Value>-100</Value> <Units>mV</Units> <DeltaValue>0</DeltaValue> <Steps> <Step> <Type>Step</Type> <First>-110</First> <Last>-110</Last> <DeltaFirst>0</DeltaFirst> <DeltaLast>0</DeltaLast> <StartTime>100</StartTime> <DeltaTime>0</DeltaTime> </Step> <Step> <Type>Step</Type> <First>-90</First> <Last>-90</Last> <DeltaFirst>10</DeltaFirst> <DeltaLast>10</DeltaLast> <StartTime>1000</StartTime> <DeltaTime>0</DeltaTime> </Step> <Step> <Type>Step</Type> <First>-110</First> <Last>-110</Last> <DeltaFirst>0</DeltaFirst> <DeltaLast>0</DeltaLast> <StartTime>100</StartTime> <DeltaTime>0</DeltaTime> </Step> </Steps> </VariableAndProtocol> <VariableAndProtocol> <Name>External-K</Name> <Value>2</Value> <Units>mM</Units> <DeltaValue>0</DeltaValue> <Steps> <Step> <Type>Step</Type> <First>2</First> <Last>2</Last> <DeltaFirst>0</DeltaFirst> <DeltaLast>0</DeltaLast> <StartTime>1000</StartTime> <DeltaTime>0</DeltaTime> </Step> </Steps> </VariableAndProtocol> <VariableAndProtocol> <Name>Internal-K</Name> <Value>100</Value> <Units>mM</Units> <DeltaValue>0</DeltaValue> <Steps> <Step> <Type>Step</Type> <First>100</First> <Last>100</Last> <DeltaFirst>0</DeltaFirst> <DeltaLast>0</DeltaLast> <StartTime>1000</StartTime> <DeltaTime>0</DeltaTime> </Step> </Steps> </VariableAndProtocol> </VariableList> </Variables> <SimulationMethod>QMatrix</SimulationMethod> <NChannels>1000</NChannels> <SimulationType>IonicCurrent</SimulationType> <AddNoise>false</AddNoise> <NoiseStandardDeviation>0.1</NoiseStandardDeviation> </ExperimentBase> <ExperimentBase d4p1:type="ExperimentIvsT" xmlns:d4p1="http://www.w3.org/2001/XMLSchema-instance"> <Name>DP Inactivation</Name> <Temperature>34</Temperature> <ExperimentType>CurrentVsTime</ExperimentType> <Sweeps>500</Sweeps> <Time_Sweep_ms>805</Time_Sweep_ms> <SampleInterval_us>1000</SampleInterval_us> <SampleType>NSamples</SampleType> <SamplesSweep>10001</SamplesSweep> <InitialProbabilities> <InitialSweepState>SteadyState</InitialSweepState> <IntervalBetweenSweeps>1000</IntervalBetweenSweeps> <SchemeCollection> <SchemeInitialStatesProbabilities> <GateName>Scheme</GateName> <InitialProbabilities> <InitialStateProbability> <StateName>C0</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>C1</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>C2</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>C3</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>C4</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>O</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>C5</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>I0</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>I1</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>I2</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>I3</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>I4</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>I5</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>I6</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>I7</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> </InitialProbabilities> </SchemeInitialStatesProbabilities> </SchemeCollection> </InitialProbabilities> <Variables> <VariableList> <VariableAndProtocol> <Name>Voltage</Name> <Value>-115</Value> <Units>mV</Units> <DeltaValue>0</DeltaValue> <Steps> <Step> <Type>Step</Type> <First>-115</First> <Last>-115</Last> <DeltaFirst>0</DeltaFirst> <DeltaLast>0</DeltaLast> <StartTime>100</StartTime> <DeltaTime>0</DeltaTime> </Step> <Step> <Type>Step</Type> <First>-20</First> <Last>-20</Last> <DeltaFirst>0</DeltaFirst> <DeltaLast>0</DeltaLast> <StartTime>0</StartTime> <DeltaTime>0.1</DeltaTime> </Step> <Step> <Type>Step</Type> <First>-115</First> <Last>-115</Last> <DeltaFirst>0</DeltaFirst> <DeltaLast>0</DeltaLast> <StartTime>0</StartTime> <DeltaTime>0</DeltaTime> </Step> <Step> <Type>Step</Type> <First>70</First> <Last>70</Last> <DeltaFirst>0</DeltaFirst> <DeltaLast>0</DeltaLast> <StartTime>100</StartTime> <DeltaTime>0</DeltaTime> </Step> <Step> <Type>Step</Type> <First>-115</First> <Last>-115</Last> <DeltaFirst>0</DeltaFirst> <DeltaLast>0</DeltaLast> <StartTime>100</StartTime> <DeltaTime>0</DeltaTime> </Step> </Steps> </VariableAndProtocol> <VariableAndProtocol> <Name>External-K</Name> <Value>2</Value> <Units>mM</Units> <DeltaValue>0</DeltaValue> <Steps> <Step> <Type>Step</Type> <First>2</First> <Last>2</Last> <DeltaFirst>0</DeltaFirst> <DeltaLast>0</DeltaLast> <StartTime>1000</StartTime> <DeltaTime>0</DeltaTime> </Step> </Steps> </VariableAndProtocol> <VariableAndProtocol> <Name>Internal-K</Name> <Value>100</Value> <Units>mM</Units> <DeltaValue>0</DeltaValue> <Steps> <Step> <Type>Step</Type> <First>100</First> <Last>100</Last> <DeltaFirst>0</DeltaFirst> <DeltaLast>0</DeltaLast> <StartTime>1000</StartTime> <DeltaTime>0</DeltaTime> </Step> </Steps> </VariableAndProtocol> </VariableList> </Variables> <SimulationMethod>QMatrix</SimulationMethod> <NChannels>1000</NChannels> <SimulationType>IonicCurrent</SimulationType> <AddNoise>false</AddNoise> <NoiseStandardDeviation>0.1</NoiseStandardDeviation> </ExperimentBase> <ExperimentBase d4p1:type="ExperimentIvsT" xmlns:d4p1="http://www.w3.org/2001/XMLSchema-instance"> <Name>SP Inactivation</Name> <Temperature>20</Temperature> <ExperimentType>CurrentVsTime</ExperimentType> <Sweeps>1</Sweeps> <Time_Sweep_ms>1200</Time_Sweep_ms> <SampleInterval_us>100</SampleInterval_us> <SampleType>NSamples</SampleType> <SamplesSweep>1001</SamplesSweep> <InitialProbabilities> <InitialSweepState>SteadyState</InitialSweepState> <IntervalBetweenSweeps>1000</IntervalBetweenSweeps> <SchemeCollection> <SchemeInitialStatesProbabilities> <GateName>Scheme</GateName> <InitialProbabilities> <InitialStateProbability> <StateName>C0</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>C1</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>C2</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>C3</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>C4</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>O</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>C5</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>I0</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>I1</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>I2</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>I3</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>I4</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>I5</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>I6</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> <InitialStateProbability> <StateName>I7</StateName> <Probability>0.06666667</Probability> <RelativeProbability>0</RelativeProbability> </InitialStateProbability> </InitialProbabilities> </SchemeInitialStatesProbabilities> </SchemeCollection> </InitialProbabilities> <Variables> <VariableList> <VariableAndProtocol> <Name>Voltage</Name> <Value>-100</Value> <Units>mV</Units> <DeltaValue>0</DeltaValue> <Steps> <Step> <Type>Step</Type> <First>-110</First> <Last>-110</Last> <DeltaFirst>0</DeltaFirst> <DeltaLast>0</DeltaLast> <StartTime>100</StartTime> <DeltaTime>0</DeltaTime> </Step> <Step> <Type>Step</Type> <First>-20</First> <Last>-20</Last> <DeltaFirst>0</DeltaFirst> <DeltaLast>0</DeltaLast> <StartTime>1000</StartTime> <DeltaTime>0</DeltaTime> </Step> <Step> <Type>Step</Type> <First>-110</First> <Last>-110</Last> <DeltaFirst>0</DeltaFirst> <DeltaLast>0</DeltaLast> <StartTime>100</StartTime> <DeltaTime>0</DeltaTime> </Step> </Steps> </VariableAndProtocol> <VariableAndProtocol> <Name>External-K</Name> <Value>2</Value> <Units>mM</Units> <DeltaValue>0</DeltaValue> <Steps> <Step> <Type>Step</Type> <First>2</First> <Last>2</Last> <DeltaFirst>0</DeltaFirst> <DeltaLast>0</DeltaLast> <StartTime>1000</StartTime> <DeltaTime>0</DeltaTime> </Step> </Steps> </VariableAndProtocol> <VariableAndProtocol> <Name>Internal-K</Name> <Value>100</Value> <Units>mM</Units> <DeltaValue>0</DeltaValue> <Steps> <Step> <Type>Step</Type> <First>100</First> <Last>100</Last> <DeltaFirst>0</DeltaFirst> <DeltaLast>0</DeltaLast> <StartTime>1000</StartTime> <DeltaTime>0</DeltaTime> </Step> </Steps> </VariableAndProtocol> </VariableList> </Variables> <SimulationMethod>QMatrix</SimulationMethod> <NChannels>1000</NChannels> <SimulationType>IonicCurrent</SimulationType> <AddNoise>false</AddNoise> <NoiseStandardDeviation>0.1</NoiseStandardDeviation> </ExperimentBase> <ExperimentBase d4p1:type="ExperimentExpressionVsX" xmlns:d4p1="http://www.w3.org/2001/XMLSchema-instance"> <Name>SSI</Name> <Temperature>34</Temperature> <ExperimentType>SteadyStateExpressionVsX</ExperimentType> <Variables> <VariableList> <VariableAndDelta> <Name>Voltage</Name> <Value>0</Value> <Units>mV</Units> <DeltaValue>0</DeltaValue> </VariableAndDelta> <VariableAndDelta> <Name>External-K</Name> <Value>100</Value> <Units>mM</Units> <DeltaValue>0</DeltaValue> </VariableAndDelta> <VariableAndDelta> <Name>Internal-K</Name> <Value>100</Value> <Units>mM</Units> <DeltaValue>0</DeltaValue> </VariableAndDelta> </VariableList> </Variables> <Sweeps>1</Sweeps> <SamplesSweep>300</SamplesSweep> <SelectedVariable>Voltage</SelectedVariable> <StartValue>-100</StartValue> <FinalValue>100</FinalValue> <Expression>C0+C1+C2+C3+C4+C5+O</Expression> </ExperimentBase> </List> </ExperimentList> <IndexOfSelectedExperiment>2</IndexOfSelectedExperiment> <Description> <string /> <string /> <string>Beck, E.J., M. Bowlby, W.F. An, K.J. Rhodes, and M. Covarrubias. 2002.</string> <string> Remodeling inactivation gating of Kv4 channels by KChIP-1, a small-molecular-weight calcium binding protein. J. Physiol. 538:691-706. </string> </Description> <Channel d2p1:type="ChannelScheme" xmlns:d2p1="http://www.w3.org/2001/XMLSchema-instance"> <Name>Channel</Name> <IonicCurrentList> <IonicCurrentBase d2p1:type="OhmicCurrent"> <Ion> <Name>K</Name> <Type>Ion</Type> <Valence>1</Valence> </Ion> <Conductance>10</Conductance> </IonicCurrentBase> </IonicCurrentList> <Scheme> <Name>Scheme</Name> <SchemeID>620486</SchemeID> <LayersToShow> <LayerA>0</LayerA> <LayerB>0</LayerB> </LayersToShow> <TransitionCollection> <TransitionView d2p1:type="TransitionViewAB"> <Transition d2p1:type="TransitionAB"> <StateA>C0</StateA> <StateB>C1</StateB> <Activated>true</Activated> <RateA>4*a</RateA> <RateB>b</RateB> </Transition> </TransitionView> <TransitionView d2p1:type="TransitionViewAB"> <Transition d2p1:type="TransitionAB"> <StateA>C1</StateA> <StateB>C2</StateB> <Activated>true</Activated> <RateA>3*a</RateA> <RateB>2*b</RateB> </Transition> </TransitionView> <TransitionView d2p1:type="TransitionViewAB"> <Transition d2p1:type="TransitionAB"> <StateA>C2</StateA> <StateB>C3</StateB> <Activated>true</Activated> <RateA>2*a</RateA> <RateB>3*b</RateB> </Transition> </TransitionView> <TransitionView d2p1:type="TransitionViewAB"> <Transition d2p1:type="TransitionAB"> <StateA>C3</StateA> <StateB>C4</StateB> <Activated>true</Activated> <RateA>a</RateA> <RateB>4*b</RateB> </Transition> </TransitionView> <TransitionView d2p1:type="TransitionViewAB"> <Transition d2p1:type="TransitionAB"> <StateA>C4</StateA> <StateB>C5</StateB> <Activated>true</Activated> <RateA>c</RateA> <RateB>d</RateB> </Transition> </TransitionView> <TransitionView d2p1:type="TransitionViewAB"> <Transition d2p1:type="TransitionAB"> <StateA>C5</StateA> <StateB>O</StateB> <Activated>true</Activated> <RateA>kco</RateA> <RateB>koc</RateB> </Transition> </TransitionView> <TransitionView d2p1:type="TransitionViewAB"> <Transition d2p1:type="TransitionAB"> <StateA>C0</StateA> <StateB>I0</StateB> <Activated>true</Activated> <RateA>kci*f^4</RateA> <RateB>kic/(f^4)</RateB> </Transition> </TransitionView> <TransitionView d2p1:type="TransitionViewAB"> <Transition d2p1:type="TransitionAB"> <StateA>C1</StateA> <StateB>I1</StateB> <Activated>true</Activated> <RateA>kci*f^3</RateA> <RateB>kic/f^3</RateB> </Transition> </TransitionView> <TransitionView d2p1:type="TransitionViewAB"> <Transition d2p1:type="TransitionAB"> <StateA>C2</StateA> <StateB>I2</StateB> <Activated>true</Activated> <RateA>kci*f^2</RateA> <RateB>kic/(f^2)</RateB> </Transition> </TransitionView> <TransitionView d2p1:type="TransitionViewAB"> <Transition d2p1:type="TransitionAB"> <StateA>C3</StateA> <StateB>I3</StateB> <Activated>true</Activated> <RateA>kci*f</RateA> <RateB>kic/f</RateB> </Transition> </TransitionView> <TransitionView d2p1:type="TransitionViewAB"> <Transition d2p1:type="TransitionAB"> <StateA>C4</StateA> <StateB>I4</StateB> <Activated>true</Activated> <RateA>kci</RateA> <RateB>kic</RateB> </Transition> </TransitionView> <TransitionView d2p1:type="TransitionViewAB"> <Transition d2p1:type="TransitionAB"> <StateA>C5</StateA> <StateB>I5</StateB> <Activated>true</Activated> <RateA>kci*g</RateA> <RateB>kic*g</RateB> </Transition> </TransitionView> <TransitionView d2p1:type="TransitionViewAB"> <Transition d2p1:type="TransitionAB"> <StateA>I0</StateA> <StateB>I1</StateB> <Activated>true</Activated> <RateA>4*a/f</RateA> <RateB>b*f</RateB> </Transition> </TransitionView> <TransitionView d2p1:type="TransitionViewAB"> <Transition d2p1:type="TransitionAB"> <StateA>I1</StateA> <StateB>I2</StateB> <Activated>true</Activated> <RateA>3*a/f</RateA> <RateB>2*b*f</RateB> </Transition> </TransitionView> <TransitionView d2p1:type="TransitionViewAB"> <Transition d2p1:type="TransitionAB"> <StateA>I2</StateA> <StateB>I3</StateB> <Activated>true</Activated> <RateA>2*a/f</RateA> <RateB>3*b*f</RateB> </Transition> </TransitionView> <TransitionView d2p1:type="TransitionViewAB"> <Transition d2p1:type="TransitionAB"> <StateA>I3</StateA> <StateB>I4</StateB> <Activated>true</Activated> <RateA>a/f</RateA> <RateB>4*b*f</RateB> </Transition> </TransitionView> <TransitionView d2p1:type="TransitionViewAB"> <Transition d2p1:type="TransitionAB"> <StateA>I4</StateA> <StateB>I5</StateB> <Activated>true</Activated> <RateA>c*g</RateA> <RateB>d/g</RateB> </Transition> </TransitionView> <TransitionView d2p1:type="TransitionViewAB"> <Transition d2p1:type="TransitionAB"> <StateA>O</StateA> <StateB>I6</StateB> <Activated>true</Activated> <RateA>koi</RateA> <RateB>kio</RateB> </Transition> </TransitionView> <TransitionView d2p1:type="TransitionViewAB"> <Transition d2p1:type="TransitionAB"> <StateA>I6</StateA> <StateB>I7</StateB> <Activated>true</Activated> <RateA>kii2</RateA> <RateB>ki2i</RateB> </Transition> </TransitionView> </TransitionCollection> <SchemeFunctionsList> <FunctionBase d2p1:type="ExponentialFRTFunction"> <Name>a</Name> <Type>ExponentialFRT</Type> <NumberParameters>2</NumberParameters> <P> <double>7000</double> <double>0.315646648</double> </P> </FunctionBase> <FunctionBase d2p1:type="ExponentialFRTFunction"> <Name>b</Name> <Type>ExponentialFRT</Type> <NumberParameters>2</NumberParameters> <P> <double>90</double> <double>-2.062276</double> </P> </FunctionBase> <FunctionBase d2p1:type="ExponentialFRTFunction"> <Name>c</Name> <Type>ExponentialFRT</Type> <NumberParameters>2</NumberParameters> <P> <double>1012.16107</double> <double>0.500095665</double> </P> </FunctionBase> <FunctionBase d2p1:type="ExponentialFRTFunction"> <Name>d</Name> <Type>ExponentialFRT</Type> <NumberParameters>2</NumberParameters> <P> <double>2498.881</double> <double>-1.15446687</double> </P> </FunctionBase> <FunctionBase d2p1:type="ExponentialFRTFunction"> <Name>kco</Name> <Type>ExponentialFRT</Type> <NumberParameters>2</NumberParameters> <P> <double>7690.49072</double> <double>0.05502051</double> </P> </FunctionBase> <FunctionBase d2p1:type="ExponentialFRTFunction"> <Name>koc</Name> 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