TITLE stochastic release probability
COMMENT
Milstein 2015. When this point process receives a spike, it requests a random number from a random number generator and
compares it to an internal release probability variable 'P' to decide if a single vesicle should be released at this
synapse. The release probability is then updated to follow specified dynamics of facilitation and depression. In order
to make use of this event, additional synaptic mechanisms must be connected to this point process via a NetCon object.
Dynamics based on:
Implementation of the model of short-term facilitation and depression described in
Varela, J.A., Sen, K., Gibson, J., Fost, J., Abbott, L.R., and Nelson, S.B.
A quantitative description of short-term plasticity at excitatory synapses
in layer 2/3 of rat primary visual cortex
Journal of Neuroscience 17:7926-7940, 1997
ENDCOMMENT
NEURON {
POINT_PROCESS Pr
RANGE P, P0, random, f, tau_F, d1, tau_D1, F, D1, tlast
THREADSAFE
POINTER randObjPtr
}
PARAMETER {
: the (1) is needed for the range limits to be effective
P0 = 0.200 (1) < 0, 1 > : basal release probability
f = 1.769 (1) < 0, 1e9 > : additive facilitation per spike
tau_F = 67.351 (ms) < 1e-9, 1e9 > : rate of decay back to baseline following facilitation
d1 = 0.878 (1) < 0, 1 > : multiplicative fast depression per spike
tau_D1 = 92.918 (ms) < 1e-9, 1e9 > : rate of decay back to baseline following fast depression
:d2 = 0.975 (1) < 0, 1 > : multiplicative slow depression per spike
:tau_D2 = 9200 (ms) < 1e-9, 1e9 > : rate of decay back to baseline following slow depression
}
ASSIGNED {
P : instantaneous release probability
randObjPtr : pointer to a hoc random number generator Random.uniform(0,1)
random : individual instance of random number
F : current level of facilitation
D1 : current level of fast depression
:D2 : current level of slow depression
tlast (ms) : time of last spike
}
INITIAL {
P = P0
random = 1
F = 1
D1 = 1
:D2 = 1
}
NET_RECEIVE(weight) {
INITIAL {
tlast = t
}
F = 1 + (F-1)*exp(-(t - tlast)/tau_F)
D1 = 1 - (1-D1)*exp(-(t - tlast)/tau_D1)
: D2 = 1 - (1-D2)*exp(-(t - tlast)/tau_D2)
: if (P0*F*D1*D2 > 1) {
if (P0*F*D1 > 1) {
P = 1
} else {
: P = P0*F*D1*D2
P = P0*F*D1
}
random = randGen()
if (random <= P) {
net_event(t)
}
tlast = t
F = F + f
D1 = D1 * d1
: D2 = D2 * d2
}
VERBATIM
#ifndef NRN_VERSION_GTEQ_8_2_0
double nrn_random_pick(void* r);
void* nrn_random_arg(int argpos);
#define RANDCAST
#else
#define RANDCAST (Rand*)
#endif
ENDVERBATIM
FUNCTION randGen() {
VERBATIM
if (_p_randObjPtr) {
/*
:Supports separate independent but reproducible streams for
: each instance. However, the corresponding hoc Random
: distribution MUST be set to Random.uniform(0,1)
*/
_lrandGen = nrn_random_pick(RANDCAST _p_randObjPtr);
}else{
hoc_execerror("Random object ref not set correctly for randObjPtr"," only via hoc Random");
}
ENDVERBATIM
}
PROCEDURE setRandObjRef() {
VERBATIM
void** pv4 = (void**)(&_p_randObjPtr);
if (ifarg(1)) {
*pv4 = nrn_random_arg(1);
}else{
*pv4 = (void*)0;
}
ENDVERBATIM
}