"""
Some configuration of neuronal properties so that we pick up
within this file
"""
from __future__ import print_function
def get_neuron_params(NAME, name='', number=1, SI_units=False):
if NAME=='HH_FS':
params = {'name':name, 'N':number,\
'Gl':10.,'GNa':20000.,'GK':6000,'GM':0., 'Cm':200.,'Trefrac':5.,\
'El':-65.,'EK':-90.,'ENa':50., 'Vthre':-40., 'Vreset':-60., 'VT':-53.5, 'delta_v':0.,'hhtype':1,'hhtype':1,\
'a':0., 'b': 0., 'tauw':1e9}
elif NAME=='HH_RS':
params = {'name':name, 'N':number,\
'Gl':10.,'GNa':20000.,'GK':6000,'GM':30., 'Cm':200.,'Trefrac':5.,\
'El':-65.,'EK':-90.,'ENa':50., 'Vthre':-40., 'Vreset':-60., 'VT':-53.5, 'delta_v':0.,'hhtype':1,\
'a':0., 'b': 0., 'tauw':1e9}
elif NAME=='HH_RS_DB':
params = {'name':name, 'N':number,\
'Gl':10.,'GNa':20000.,'GK':6000,'GM':30., 'Cm':200.,'Trefrac':5.,\
'El':-65.,'EK':-90.,'ENa':50., 'Vthre':-40., 'Vreset':-60., 'VT':-53.5, 'delta_v':0.,'hhtype':1,\
'a':0., 'b': 0., 'tauw':1e9}
elif NAME=='HH_RS_A':
params = {'name':name, 'N':number,\
'Gl':10.,'GNa':20000.,'GK':6000,'GM':30., 'Cm':50.,'Trefrac':5.,\
'El':-65.,'EK':-90.,'ENa':50., 'Vthre':-40., 'Vreset':-60., 'VT':-53.5, 'delta_v':0.,'hhtype':1,\
'a':0., 'b': 0., 'tauw':1e9}
elif NAME=='HH_RS_noAd':
params = {'name':name, 'N':number,\
'Gl':20.,'GNa':20000.,'GK':6000,'GM':0., 'Cm':200.,'Trefrac':5.,\
'El':-65.,'EK':-90.,'ENa':50., 'Vthre':-40., 'Vreset':-60., 'VT':-53.5, 'delta_v':0.,'hhtype':1,\
'a':0., 'b': 0., 'tauw':1e9}
elif NAME=='HH_RS1':
params = {'name':name, 'N':number,\
'Gl':10.,'GNa':20000.,'GK':6000,'GM':80., 'Cm':200.,'Trefrac':5.,\
'El':-65.,'EK':-90.,'ENa':50., 'Vthre':-40., 'Vreset':-60., 'VT':-53.5, 'delta_v':0.,'hhtype':1,\
'a':0., 'b': 0., 'tauw':1e9}
elif NAME=='HH_RS2':
params = {'name':name, 'N':number,\
'Gl':10.,'GNa':20000.,'GK':6000,'GM':15., 'Cm':200.,'Trefrac':5.,\
'El':-65.,'EK':-90.,'ENa':50., 'Vthre':-40., 'Vreset':-60., 'VT':-53.5, 'delta_v':0.,'hhtype':1,\
'a':0., 'b': 0., 'tauw':1e9}
else:
print('====================================================')
print('------------ CELL NOT RECOGNIZED !! ---------------')
print('====================================================')
if SI_units:
print('cell parameters in SI units')
# mV to V
params['El'], params['Vthre'], params['Vreset'], params['delta_v'] =\
1e-3*params['El'], 1e-3*params['Vthre'], 1e-3*params['Vreset'], 1e-3*params['delta_v']
# ms to s
params['Trefrac'], params['tauw'] = 1e-3*params['Trefrac'], 1e-3*params['tauw']
# nS to S
#params['a'], params['Gl'],params['GNa'],params['GK'] = 1e-9*params['a'], 1e-9*params['Gl'],1e-9*params['GNa'],1e-9*params['GK']
params['a'], params['Gl']= 1e-9*params['a'], 1e-9*params['Gl']
# pF to F and pA to A
params['Cm'], params['b'] = 1e-12*params['Cm'], 1e-12*params['b']
if(params['hhtype']>0):
params['GNa'],params['GK'],params['GM'] = 1e-9*params['GNa'],1e-9*params['GK'],1e-9*params['GM']
params['VT'],params['ENa'],params['EK'] =1e-3*params['VT'],1e-3*params['ENa'],1e-3*params['EK']
else:
print('cell parameters --NOT-- in SI units')
return params.copy()
if __name__=='__main__':
print(__doc__)