//genesis function add_squid_graphs(path) str path, gpath float Xmax =8 // Sec float Ymin = -.07 float Ymax = 0.03 create xform {path}/graphs [50,10,500,550] -notitle create xlabel {path}/graphs/label [10,0,98%,25] -label {path} // plot membrane potential gpath = (path) @ "/graphs/Vm" create xgraph {gpath} [10,10:label.bottom,49%,45%] -title \ "membrane potential" create xbutton {gpath}"scale" [-50:Vm.right,10:label.bottom,50,25] \ -title "scale" -script "set_scale "{gpath} setfield {gpath} XUnits "t (sec)" YUnits "voltage (V)" setfield {gpath} xmax {Xmax} ymin {Ymin} \ ymax {Ymax} // plot injection currents gpath = (path) @ "/graphs/inj" create xgraph {gpath} \ [10,10:Vm.bottom,49%,45%] -title \ "injection current" create xbutton {gpath}"scale" [-50:inj.right,10:Vm.bottom,50,25] -title \ "scale" -script "set_scale "{gpath} setfield {gpath} XUnits "t (sec)" YUnits "current (A)" setfield {gpath} xmax {Xmax} ymin {-10e-9} ymax {10e-9} // plot channel conductances gpath = (path) @ "/graphs/Gk" create xgraph {gpath} \ [10:Vm.right,10:label.bottom,49%,45%] -title "channel conductance" create xbutton {gpath}"scale" [-50:Gk.right,10:label.bottom,50,25] \ -title "scale" -script "set_scale "{gpath} setfield {gpath} XUnits "t (sec)" YUnits "conductance (S)" setfield {gpath} xmax {Xmax} ymin 0.0 ymax 5e-10 // plot channel currents gpath = (path) @ "/graphs/Ik" create xgraph {gpath} \ [10:inj.right,10:Gk.bottom,49%,45%] -title "channel current" create xbutton {gpath}"scale" [-50:Ik.right,10:Gk.bottom,50,25] \ -title "scale" -script "set_scale "{gpath} setfield {gpath} XUnits "t (sec)" YUnits "current (A)" setfield {gpath} xmax {Xmax} ymin -5e-11 ymax 5e-11 graphclock {path} 1 // make an exception for the injection graph - use simulation clock useclock {path}"/graphs/inj" 0 showgraphics {path} end function set_scale(gpath) str gpath float xmin, xmax, ymin, ymax, overlay xmin = {getfield {gpath} xmin} xmax = {getfield {gpath} xmax} ymin = {getfield {gpath} ymin} ymax = {getfield {gpath} ymax} overlay = {getfield {gpath} overlay} pushe /forms/gscale setfield /forms/gscale gpath {gpath} setfield xmin value {xmin} setfield xmax value {xmax} setfield ymin value {ymin} setfield ymax value {ymax} setfield overlay value {overlay} xshow . pope end