"""
my_batches.py
Batch simulations for EEE project
contact: joe.w.graham@gmail.com
"""
from collections import OrderedDict
import batch_utils
import numpy as np
import os
from cfg import cfg
batchoutputdir = "batch_data"
if not os.path.exists(batchoutputdir):
os.mkdir(batchoutputdir)
numsyns = cfg.glutSpread
#glutAmps = [0.045, 0.050, 0.055, 0.060, 0.065, 0.070, 0.075]
glutAmps = [0.075]
###############################################################################
# Batches
# -------
#
###############################################################################
batches = {}
# Varying glutamate stim amplitude (1D batch)
batch = {}
batch["label"] = "Control"
batch["cfgFile"] = "cfg.py"
batch["netParamsFile"] = "netParams.py"
params = OrderedDict()
params["glutAmp"] = list(np.array(glutAmps) / numsyns)
batch["params"] = params
batches[batch["label"]] = batch
# # No mgblock, varying glutamate stim amplitude (1D batch)
# batch = {}
# batch["label"] = "NoMgBlock"
# batch["cfgFile"] = "cfg.py"
# batch["netParamsFile"] = "netParams_nomgb.py"
# params = OrderedDict()
# params["glutAmp"] = list(np.array(glutAmps) / numsyns)
# batch["params"] = params
# batches[batch["label"]] = batch
# # Varying glutamate stim amplitude and ratioAMPANMDA
# batch = {}
# batch["label"] = "glutAmp_ratioAMPANMDA"
# batch["cfgFile"] = "cfg.py"
# batch["netParamsFile"] = "netParams.py"
# params = OrderedDict()
# params["glutAmp"] = list(np.array(glutAmps) / numsyns)
# params["ratioAMPANMDA"] = [0.2, 1.0, 10.0]
# batch["params"] = params
# batches[batch["label"]] = batch
###############################################################################
# Main code: runs all batches
###############################################################################
if __name__ == '__main__':
import time
start = time.time()
# Run all batches
for label, batch in batches.items():
print("Running batch with label: " + label)
print
batch_utils.run_batch(**batch)
stop = time.time()
print
print("Completed eee/sim/batches/batch_plat_overlay/my_batches.py")
print("Duration (s): " + str(stop-start))
print("Please close this terminal and open another.")