TITLE Calcium activated Potassium channel (SK)
: Author: Chitaranjan Mahapatra (chitaranjan@iitb.ac.in)
: Computational Neurophysiology Lab
: Indian Institute of Technology Bombay, India
: For details refer:
: Mahapatra C, Brain KL, Manchanda R, A biophysically constrained computational model of the action potential
: of mouse urinary bladder smooth muscle. PLOS One (2018)
:Kinetics were fit to data from Filipis et al. 2022
:SK channel ( function of Calcium only)
NEURON {
SUFFIX sk
USEION k READ ek WRITE ik
USEION tca READ tcai
USEION nca READ ncai
RANGE gbar,gkahp,ik, ninf,taun,g
GLOBAL Cq10,mt, a0, b0, cahco, carco
}
UNITS {
(mA) = (milliamp)
(mV) = (millivolt)
(molar) = (1/liter)
(mM) = (millimolar)
(pS) = (picosiemens)
(um) = (micron)
}
PARAMETER {
gbar = 0.01 (S/cm2)
: n = 4
cai = 50.e-6 (mM)
a0 = 1.3e4 (1/ms-mM)
b0 = 0.06 (1/ms)
celsius = 37(degC)
Cq10 = 2
mt = 0.2
tcai (mM)
ncai (mM)
cahco=0.0
carco=1
}
STATE { n }
ASSIGNED {
ik (mA/cm2)
g (S/cm2)
ninf
taun (ms)
a (1/ms)
v (mV)
ek (mV)
}
BREAKPOINT {
SOLVE state METHOD cnexp
g = gbar*n
ik = g*(v-ek)
}
INITIAL {
rate(tcai, ncai)
n=ninf
}
DERIVATIVE state {
rate(tcai,ncai)
n' = (ninf - n)/taun
}
PROCEDURE rate(tcai (mM), ncai(mM)) {
LOCAL q10
q10 = Cq10^((celsius - 22 (degC))/10 (degC) )
:a = a0*(tcai*carco+ncai*cahco)/10 :eg
a = a0*(tcai*carco+ncai*cahco)^4
:if (a < 0.05) {
: a = 0
:}
:taun = b0 :eg
taun = mt * q10* (0.2*(q10/(a + b0)))
:ninf = a :eg
ninf = a/(a+b0)
}