TITLE Decay of submembrane calcium concentration
: Author: Chitaranjan Mahapatra (chitaranjan@iitb.ac.in)
: Computational Neurophysiology Lab
: Indian Institute of Technology Bombay, India
: For details refer:
: Mahapatra C, Brain KL, Manchanda R, A biophysically constrained computational model of the action potential
: of mouse urinary bladder smooth muscle. PLOS One (2018)
: Inward Ca flux is maintained by T-type and L-type Ca channel
NEURON {
SUFFIX CAD
USEION ca READ ica,cai WRITE cai VALENCE 2
RANGE depth,kd,cainf,taur, mt
}
UNITS {
(molar) = (1/liter)
(mM) = (millimolar)
(um) = (micron)
(mA) = (milliamp)
(msM) = (ms mM)
}
CONSTANT {
FARADAY = 96489 (coul)
}
PARAMETER {
depth = 0.41 (um)
taur = 1800 (ms)
cainf = 0.00015 (mM)
kd = 0.0003 (mM)
mt = -100
}
STATE {
cai (mM)
}
INITIAL {
cai = kd
}
ASSIGNED {
ica (mA/cm2)
drive_channel (mM/ms)
}
BREAKPOINT {
SOLVE state METHOD derivimplicit
}
DERIVATIVE state {
drive_channel = - (1000) * ica / (2 * FARADAY * depth)
if (drive_channel <= 0.) { drive_channel = 0. } : cannot pump below resting level
cai' = drive_channel - mt *(cainf-cai)/taur
}