load_file("nrngui.hoc") // neuron main menu
xopen("ri06.nrn") // geometry
objref soma
somaA soma = new SectionRef()
xopen("ri06_memb.hoc") // membrane mechanisms
// choose the types of conductances to include
hblock = 0 // between 0 and 1, for fraction blocked. Use 0 or 1
kablock = 0 // between 0 and 1 for fraction blocked. Use 0 or 1
kdrblock = 0 // between 0 and 1 for fraction blocked. Use 0 or 1
nablock = 0 // between 0 and 1 for fraction blocked. Use 0 or 1
init_routine = 1 // 1 for using Carnevale's init routine
usecvode = 1 // 1 for using cvode
// these next few lines correct for the fact that the soma is elliptical rather than cylindrical
// due to an idiosynchrosy of NEURON, you have to do the area call first
access somaA
area(0.5)
correctsoma()
init_params()
insert_pass()
insert_h()
insert_kdr()
insert_ka()
insert_na()
reinit_props()
inittime=10000
//Set up current clamp objects
objectvar elecstim
somaA elecstim=new IClamp(0.5)
elecstim.del = inittime
elecstim.dur = 800
elecstim.amp = 0.13
tstop=inittime+elecstim.dur+100
xopen("ri06_graphAPtrain.hoc")
proc init() {local dtsav
cvode.active(0)
reinit_props()
v_init = Vrest // v_init is the value displayed in the run control panel
finitialize(v_init)
fcurrent()
if (init_routine == 1) {
dtsav = dt
dt = 10
t = 1e6
for i = 0,40 {
fadvance()
}
dt = dtsav
finitialize()
}
cvode.active(1)
}