# Mechanisms and implications of high depolarization baseline offsets in conductance-based neuronal models
**Kumar, A., Shahul, A. K., & Bhalla, U. S. (2025). Mechanisms and implications of high depolarization baseline offsets in conductance-based neuronal models. *Journal of Neurophysiology*. doi:10.1152/jn.00617.2024**
## Requirements
1. A debian based linux system such as Ubuntu or Linux mint. All codes will work on WSL in Windows too. Other systems were not tested.
2. python3.8-3.12. Not tested on other python versions.
3. [pymoose](https://github.com/BhallaLab/moose-core) (must be built from source by following the instructions)
4. [NEURON with python support](https://nrn.readthedocs.io/en/8.2.6/)
### Requirements to regenerate data
5. [goMultiprocessing](https://github.com/analkumar2/parallelize-forloops)
6. [brute_curvefit](https://github.com/analkumar2/brute_curvefit)
## Folder descriptions
- **expdata** - Contains raw experimental data
- **Fig1-9, SuppFigS1** - Contains scripts to generate paper figures
- **FigAbstract** - Abstract figure
- **helperScripts** - Contains script to generate some data and utility scripts
- **Kinetics** - Contains files that describe ion channel kinetics used in this study