/* In this experiment I'm going to test a classic 2 exponential NMDA model
Its voltage dependent block provided by Mg and happens fast
I'm going to fit my model to the Wild Type NMDAR recordings obtained from
Dendrites of CA1-CA3 Neurons Reported in Spruston95
Keivan Moradi
*/
load_file("nrngui.hoc")
load_file("params.hoc")
//fully activates cache efficiency
cvode.cache_efficient(1)
tstop = 600
dt = .025
celsius = 18 //room temperature
v_init = 40
Tau1 = 3.5093
Tau2 = 436.9
SynWeight = 0.40323
// ------------------
create soma
access soma
objref sNMDA, stim, nc
stim = new NetStim(.5)
stim.interval = 20 //ms (mean) time between spikes
stim.number = 1 //(average) number of spikes
stim.start = 9 //ms (most likely) start time of first spike
stim.noise = 0 //---- range 0 to 1. Fractional randomness.
//0 deterministic, 1 intervals have negexp distribution.
sNMDA = new Exp2NMDA(.5)
nc = new NetCon(stim, sNMDA)
proc init_NMDA() {
sNMDA.tau1 = Tau1
sNMDA.tau2 = Tau2
nc.weight = SynWeight
nc.delay = 1
}
objref FinNMDA
FinNMDA = new FInitializeHandler(3,"init_NMDA()")
objref vc
vc = new VClamp(.5)
vc.dur[0] = 56.5
vc.amp[0] = 40
vc.dur[1] = 48.5
vc.amp[1] = -80
vc.dur[2] = 500
vc.amp[2] = 40
// objref iNMDA, iFile, time, tFile
// iNMDA = new Vector()
// iNMDA.record(&sNMDA.i)
// iFile = new File("iFile.dat")
// iFile.wopen("iFile.dat")
// time = new Vector()
// time.record(&t)
// tFile = new File("tFile.dat")
// tFile.wopen("tFile.dat")
// init()
// run()
// iNMDA.printf(iFile)
// iFile.close()
// time.printf(tFile)
// tFile.close()
load_file("MRF-EXP3NMDA-VD.ses")