#!/bin/bash

geom=5

extstim=8
junction=1

#extstim=20
#junction=13

#extstim=25
#junction=23

#extstim=29
#junction=27

#extstim=34
#junction=33

#extstim=43
#junction=43

qsub -N vs_${geom}_${extstim} -l h_rt=24:00:00 -b y x86_64/special -nogui simulation_base.hoc -c "set_arg\($geom,$extstim,$junction\)" vs-arg_cutoff.hoc