#!/bin/bash # This script runs the CUBA simulations once with two threads, # once with two MPI processes, dumps membrane potentials at # the end and compares the resulting files. # # If all goes well, output should look like (note the four OK lines) ################################################################# #/virtual_processes 2 def /off_grid false def (cuba_458.sli) run #----------------------------------------------------------------- #/virtual_processes 2 def /off_grid false def (cuba_458.sli) run #----------------------------------------------------------------- #Plain Offgrid OK ################################################################# #/virtual_processes 2 def /off_grid true def (cuba_458.sli) run #----------------------------------------------------------------- #/virtual_processes 2 def /off_grid true def (cuba_458.sli) run #----------------------------------------------------------------- #Plain Ongrid OK ################################################################# #/virtual_processes 2 def /off_grid false def (cuba_ps_458.sli) run #----------------------------------------------------------------- #/virtual_processes 2 def /off_grid false def (cuba_ps_458.sli) run #----------------------------------------------------------------- #PS Offgrid OK ################################################################# #/virtual_processes 2 def /off_grid true def (cuba_ps_458.sli) run #----------------------------------------------------------------- #/virtual_processes 2 def /off_grid true def (cuba_ps_458.sli) run #----------------------------------------------------------------- #PS Ongrid OK # Hans Ekkehard Plesser, 2010-10-18 # Some stuff for convenient testing on Stallo #PBS -lnodes=1:ppn=2 #PBS -lwalltime=00:10:00 #PBS -lpmem=1000MB #PBS -j oe #PBS -m abe # PBS needs to change, normal script just does cd . cd ${PBS_O_WORKDIR:-.} # replace with proper path to NEST exectutable NEST=/home/plesser/NEST/trunk/ins/bin/nest echo "#################################################################" conf="/virtual_processes 2 def /off_grid false def (cuba_458.sli) run" echo $conf echo $conf > conf.sli mpirun -np 1 $NEST conf.sli run_benchmark_458_dumpVm.sli > /dev/null 2>&1 echo "-----------------------------------------------------------------" conf="/virtual_processes 2 def /off_grid false def (cuba_458.sli) run" echo $conf echo $conf > conf.sli mpirun -np 2 $NEST conf.sli run_benchmark_458_dumpVm.sli > /dev/null 2>&1 echo "-----------------------------------------------------------------" sort iaf_psc_exp_false_2_1_0.dat > ts.dat sort iaf_psc_exp_false_2_2_0.dat iaf_psc_exp_false_2_2_1.dat > ms.dat diff ts.dat ms.dat && echo "Plain Offgrid OK" || echo "Plain Offgrid FAILED" rm ts.dat ms.dat echo "#################################################################" conf="/virtual_processes 2 def /off_grid true def (cuba_458.sli) run" echo $conf echo $conf > conf.sli mpirun -np 1 $NEST conf.sli run_benchmark_458_dumpVm.sli > /dev/null 2>&1 echo "-----------------------------------------------------------------" conf="/virtual_processes 2 def /off_grid true def (cuba_458.sli) run" echo $conf echo $conf > conf.sli mpirun -np 2 $NEST conf.sli run_benchmark_458_dumpVm.sli > /dev/null 2>&1 echo "-----------------------------------------------------------------" sort iaf_psc_exp_true_2_1_0.dat > ts.dat sort iaf_psc_exp_true_2_2_0.dat iaf_psc_exp_true_2_2_1.dat > ms.dat diff ts.dat ms.dat && echo "Plain Ongrid OK" || echo "Plain Ongrid FAILED" rm ts.dat ms.dat echo "#################################################################" conf="/virtual_processes 2 def /off_grid false def (cuba_ps_458.sli) run" echo $conf echo $conf > conf.sli mpirun -np 1 $NEST conf.sli run_benchmark_458_dumpVm.sli > /dev/null 2>&1 echo "-----------------------------------------------------------------" conf="/virtual_processes 2 def /off_grid false def (cuba_ps_458.sli) run" echo $conf echo $conf > conf.sli mpirun -np 2 $NEST conf.sli run_benchmark_458_dumpVm.sli > /dev/null 2>&1 echo "-----------------------------------------------------------------" sort iaf_psc_exp_ps_false_2_1_0.dat > ts.dat sort iaf_psc_exp_ps_false_2_2_0.dat iaf_psc_exp_ps_false_2_2_1.dat > ms.dat diff ts.dat ms.dat && echo "PS Offgrid OK" || echo "PS Offgrid FAILED" rm ts.dat ms.dat echo "#################################################################" conf="/virtual_processes 2 def /off_grid true def (cuba_ps_458.sli) run" echo $conf echo $conf > conf.sli mpirun -np 1 $NEST conf.sli run_benchmark_458_dumpVm.sli > /dev/null 2>&1 echo "-----------------------------------------------------------------" conf="/virtual_processes 2 def /off_grid true def (cuba_ps_458.sli) run" echo $conf echo $conf > conf.sli mpirun -np 2 $NEST conf.sli run_benchmark_458_dumpVm.sli > /dev/null 2>&1 echo "-----------------------------------------------------------------" sort iaf_psc_exp_ps_true_2_1_0.dat > ts.dat sort iaf_psc_exp_ps_true_2_2_0.dat iaf_psc_exp_ps_true_2_2_1.dat > ms.dat diff ts.dat ms.dat && echo "PS Ongrid OK" || echo "PS Ongrid FAILED" rm ts.dat ms.dat rm conf.sli rm iaf_psc_exp*_2_*.dat