from moose_nerp.prototypes.inject_func import ParadigmParams, StimParams, StimLocParams
example_pulse_seqeunce = {1:[0,1],2:[2,3],3:[0,1]}
#UNITS: frequency (f_pulse,f_burst,f_train) in Hz; width_AP, AP_interval, and ISI : sec; A_inject: Amps, n (n_pulse,n_burst,n_train,n_AP) dimensionless
AP_1 = ParadigmParams(f_pulse=50., n_pulse=1, A_inject=1e-9, f_burst=1, n_burst=1, f_train=1, n_train=1, width_AP=0.005, AP_interval=0.01, n_AP=1, ISI=-0.040, name="1_AP")
PSP_1 = ParadigmParams(f_pulse = 1., n_pulse=1,A_inject=1e-9, f_burst=1, n_burst=1, f_train=1, n_train=1, width_AP=0.005, AP_interval=0.01, n_AP=0, ISI=0, name="1_PSP")
PSP_20_Hz = ParadigmParams(f_pulse = 20., n_pulse = 20,A_inject=0, f_burst=1, n_burst=1, f_train=1, n_train=1, width_AP=0.005, AP_interval=0.01, n_AP=0, ISI=0, name="20_Hz")
PSP_100_Hz = ParadigmParams(f_pulse = 100., n_pulse = 100,A_inject=0, f_burst=1, n_burst=1, f_train=1, n_train=1, width_AP=0.005, AP_interval=0.01, n_AP=0, ISI=0, name="100_Hz")
TBS = ParadigmParams(f_pulse = 50., n_pulse = 4,A_inject=0, f_burst=8, n_burst=10, f_train=0.1, n_train=1, width_AP=1.1, AP_interval=2., n_AP=1, ISI=0, name="TBS")
TestPlas = ParadigmParams(f_pulse = 5, n_pulse = 3,A_inject=0, f_burst=1, n_burst=1, f_train=1, n_train=1, width_AP=0.005, AP_interval=0.01, n_AP=0, ISI=0, name="TestPlas")
inject = ParadigmParams(f_pulse = 5, n_pulse = 0,A_inject=0.25e-9, f_burst=1, n_burst=1, f_train=1, n_train=1, width_AP=0.005, AP_interval=0.01, n_AP=0, ISI=0, name="inject")
#This list is required to assign different stim paradigms if specified by the arg_parser
paradigm_dict={'inject':inject,
'TBS':TBS,
'TestPlas':TestPlas,
'AP_1': AP_1,
'PSP_1': PSP_1,
'PSP_20_Hz': PSP_20_Hz ,
'PSP_100_Hz': PSP_100_Hz }
#stim_dendrite list must correspond to dendrites in morphology.p
#spine_density units: fraction of spines connected in specified compartments
location=StimLocParams(which_spines='all',spine_density = 0.2, pulse_sequence=None, stim_dendrites=['31_4'])
#stim_delay units: sec
Stimulation = StimParams(Paradigm = inject,stim_delay = 0.02,StimLoc=location)
#pulse sequence should be of the form:
#{1:[0,1],2:[2,3],3:[0,1]} -- for each pulse specify a list of spines to stimulate