<Morphology> <!-- spine morphologies: width for sections along the spine --> <SpineType id="spineA"> <Section width="0.2" at="0.0" regionClass="neck"/> <Section width="0.2" at="0.2" regionClass="neck"/> <Section width="0.2" at="0.3" regionClass="head"/> <Section width="0.6" at="0.4" regionClass="head"/> <Section width="0.6" at="0.5" regionClass="PSD"/> <Section width="0.2" at="0.6" label="pointA"/> </SpineType> <!-- regionClass labels can apply to sections or segments and label regions for applying initial conditaions etc --> <!-- lengthDensity means you set the number per micron along the segment --> <SpineAllocation id="sa0" spineType="spineA" region="dend1" lengthDensity="1.0"/> <SpineAllocation id="sa1" spineType="spineA" region="dend1a" lengthDensity="0.3"/> <SpineAllocation id="sa2" spineType="spineA" region="dend2" lengthDensity="0.4"/> <SpineAllocation id="sa3" spineType="spineA" region="dend3a" lengthDensity="1.5"/> <SpineAllocation id="sa4" spineType="spineA" region="dend4" lengthDensity="0.7"/> <SpineAllocation id="sa5" spineType="spineA" region="dend5" lengthDensity="1.2"/> <SpineAllocation id="sa6" spineType="spineA" region="dend6" lengthDensity="0.7"/> <SpineAllocation id="sa7" spineType="spineA" region="dend7a" lengthDensity="1.2"/> <SpineAllocation id="sa8" spineType="spineA" region="dend8" lengthDensity="0.7"/> <SpineAllocation id="sa9" spineType="spineA" region="dend9" lengthDensity="0.7"/> <!-- <Segment id="seg1" region="region1"> <start x="1.0" y="1.0" z="0.0" r="0.3"/> <end x="5.0" y="1.0" z="0.0" r="0.3"/> </Segment> --> <Segment id="seg1" region="dend1"> <start x="0.0" y="1.0" z="0.0" r="0.3"/> <end x="2.0" y="1.0" z="0.0" r="0.3"/> </Segment> <Segment id="seg1a" region="dend1a"> <start on="seg1" at="end" /> <end x="3.0" y="1.0" z="0.0" r="0.3"/> </Segment> <Segment id="seg2" region="dend2"> <start on="seg1a" at="end" /> <end x="4.75" y="1.0" z="0.0" r="0.3" label="pointB"/> </Segment> <Segment id="seg3a" region="dend3a"> <start on="seg2" at="end" /> <end x="6.75" y="1.0" z="0.0" r="0.3"/> </Segment> <Segment id="seg3" region="dend3"> <start on="seg3a" at="end" /> <end x="7.75" y="1.0" z="0.0" r="0.3"/> </Segment> <Segment id="seg4" region="dend4"> <start on="seg3" at="end" /> <end x="9.75" y="1.0" z="0.0" r="0.3"/> </Segment> <Segment id="seg4a" region="dend4a"> <start on="seg4" at="end" /> <end x="10.75" y="1.0" z="0.0" r="0.3"/> </Segment> <Segment id="seg5" region="dend5"> <start on="seg4a" at="end" /> <end x="12.5" y="1.0" z="0.0" r="0.3" label="pointC"/> </Segment> <Segment id="seg6a" region="dend6a"> <start on="seg5" at="end" /> <end x="13.5" y="1.0" z="0.0" r="0.3"/> </Segment> <Segment id="seg6" region="dend6"> <start on="seg6a" at="end" /> <end x="15.5" y="1.0" z="0.0" r="0.3"/> </Segment> <Segment id="seg7" region="dend7"> <start on="seg6" at="end" /> <end x="16.5" y="1.0" z="0.0" r="0.3"/> </Segment> <Segment id="seg7a" region="dend7a"> <start on="seg7" at="end" /> <end x="18.5" y="1.0" z="0.0" r="0.3"/> </Segment> <Segment id="seg8" region="dend8"> <start on="seg7a" at="end" /> <end x="20.25" y="1.0" z="0.0" r="0.3" label="pointD"/> </Segment> <Segment id="seg9a" region="dend9a"> <start on="seg8" at="end" /> <end x="21.25" y="1.0" z="0.0" r="0.3"/> </Segment> <Segment id="seg9" region="dend9"> <start on="seg9a" at="end" /> <end x="23.25" y="1.0" z="0.0" r="0.3"/> </Segment> </Morphology>