## Set file for OneCellTwoOsc.ode on Thu Jan 16 20:14:41 2014 8 Number of equations and auxiliaries 20 Number of parameters # Numerical stuff 1 nout 40 nullcline mesh 8 Qual RK 10000 total 0.1 DeltaT 0 T0 0 Transient 500001 Bound 1e-12 DtMin 1 DtMax 0.001 Tolerance 0.001 Abs. Tolerance 0 Max Delay 100 Eigenvector iterates 0.001 Eigenvector tolerance 0.001 Newton tolerance 0 Poincare plane 1e-05 Boundary value tolerance 1e-05 Boundary value epsilon 20 Boundary value iterates 0 Poincare None 1 Poincare variable 1 Poincare sign 0 Stop on Section 0 Delay flag 10000 Current time 10000 Last Time 1 MyStart 1 INFLAG # Delays -50 0.004 0.33 0.03 0.93 # Bndry conds 0 0 0 0 0 # Old ICs -53.90067040881341 V 0.001974612756708118 N 0.3801759147096553 H 0.02217569847910465 C 0.9155099622361579 L # Ending ICs -52.69960139445568 V 0.002664185795415279 N 0.4224931269351594 H 0.02768333422670577 C 0.936512829933472 L # Parameters 21 Cms 0 I_aps 11.2 gk 28 gna 2 gnap 2.3 gl 0.74 Kcan 0.97 ncan 0.7 gcan 0.95 I 1.25 Ct 2.5e-05 fi 31000 P 1 Ki 0.4 Ka 400 Ve 0.2 Ke 0.005 A 0.4 Kd 0.185 sigma # Graphics 0.7071097251469876 rm -0.4999999999826661 rm 0.4999958366025516 rm 0.7071038372138505 rm 0.5000041633974482 rm -0.4999999999826661 rm 0 rm 0.7071038372138505 rm 0.7071097251469876 rm 0 1 2 1 0 0 1 2 1 0 0 1 2 1 0 0 1 2 1 0 0 1 2 1 0 0 1 2 1 0 0 1 2 1 0 0 1 2 1 0 0 1 2 1 0 0 1 2 1 0 -1000 1000 0 0 3DFlag 1 Timeflag 0 Colorflag 0 Type 1 color scale 0 minscale 10000 xmax 0 xmin 10 ymax -60 ymin 12 zmax -12 zmin 5000 0.0002 -25 0.02857142857142857 0 0.08333333333333333 45 Theta 45 Phi 0 xshft 0 yshft 0 zshft 0 xlo -60 ylo 0 -60 10000 xhi 10 yhi 10000 10 # Transpose variables etc V 2 n columns 1 n rows 1 row skip 1 col skip 1 row 0 # Coupling stuff for H funs 0 0 0 0 0 # Array plot stuff 1 NCols 0 Row 1 50 NRows 8 RowSkip 0 Zmin 1 Zmax # Torus information 0 Torus flag 1=ON 6.283185307179586 Torus period # Range information Cms -1 eq-range stab col 0 shoot flag 1=on 10 eq-range steps 0 eq_range low 1 eq_range high V V 20 Range steps 0 Cycle color 1=on 1 Reset data 1=on 1 Use old I.C.s 1=yes 0 Par1 low 0 Par2 low 1 Par1 high 1 Par2 high Cms 0 BVP side 0 color cycle flag 1=on 10 BVP range steps 0 BVP range low 1 BVP range high RHS etc ... dV/dT=(-I_K-I_NA-I_NAP-I_L-I_APS-I_CAN)/CMS dN/dT=(NINF-N)/TAUN dH/dT=(HINF-H)/TAUH dC/dT=FI*(J_ER_IN-J_ER_OUT) dL/dT=A*(KD-(C+KD)*L) CE=CE ICAN=I_CAN INAPS=I_NAP where ... MINF = 1/(1+EXP((V-VM) /SM)) NINF = 1/(1+EXP((V-VN) /SN)) MINFP = 1/(1+EXP((V-VMP)/SMP)) HINF = 1/(1+EXP((V-VH) /SH)) TAUN = TAUNB/COSH((V-VN)/(2*SN)) TAUH = TAUHB/COSH((V-VH)/(2*SH)) I_NA = GNA*MINF^3*(1-N)*(V-VNA) I_K = GK*N^4*(V-VK) I_NAP = GNAP*MINFP*H*(V-VNA) I_L = GL*(V-VLEAKS) CANINF = 1/(1+(KCAN/C)^NCAN) I_CAN = GCAN*CANINF*(V-VNA) J_ER_IN = (LL + P*( (I*C*L)/( (I+KI)*(C+KA) ) )^3 )*(CE - C) J_ER_OUT = VE*C^2/(KE^2+C^2) CE = (CT - C)/SIGMA