: Kd is the delayed rectifier current in Schild 1994
NEURON {
SUFFIX akd
USEION k READ ek WRITE ik
RANGE gbar, ek, ik
}
UNITS {
(S) = (siemens)
(mV) = (millivolts)
(mA) = (milliamp)
}
PARAMETER {
gbar =0.001061033 (S/cm2)
Q10kdn=1.40
V0p5n=-14.62 (mV):As defined by Schild 1994, zinf=1.0/(1.0+exp((V0p5z-V)/S0p5z)
S0p5n=18.38 (mV)
A_alphan=.001265 (/ms-mV) :From Schild 1994, alphan=A_alphan*(Vm+B_alphan)/(1.0-exp((Vm+B_alphan)/C_alphan)
B_alphan=14.273 (mV)
C_alphan=-10.0 (mV)
A_betan=0.125 (/ms) :From Schild 1994, betan=A_betan*exp((Vm+B_betan)/C_betan)
B_betan=55.0 (mV)
C_betan=-2.5 (mV)
}
COMMENT
The above Q10 constants were given in Schild 1994 with no indication of how they
were implemented. It was decided, based on the value of the Q10 constants given,
that the most likely answer was that the tau of each gating variable was divided by
the Q10. This is reflected below where tau_x=tau_x*(1/Q10x). Note that Schild only
provides a single constant, not any type of equation for q10. The equations are orginally
given for 22C, and this constant changes the equation to 37C.
ENDCOMMENT
ASSIGNED {
v (mV) : NEURON provides this
ik (mA/cm2)
celsius (degC)
g (S/cm2)
tau_n (ms)
ninf
alphan (/ms)
betan (/ms)
ek (mV)
}
STATE { n }
BREAKPOINT {
SOLVE states METHOD cnexp
g = gbar * n
ik = g * (v-ek)
}
INITIAL {
rates(v) : set tau_m, tau_h, hinf, minf
: assume that equilibrium has been reached
n = ninf
}
DERIVATIVE states {
rates(v)
n' = (ninf - n)/tau_n
}
FUNCTION alpha(Vm (mV)) (/ms) {
alphan=(A_alphan*(Vm+B_alphan))/(1.0-exp((Vm+B_alphan)/C_alphan))
}
FUNCTION beta(Vm (mV)) (/ms) {
betan=A_betan*exp((Vm+B_betan)/C_betan)
}
FUNCTION rates(Vm (mV)) (/ms) {
alpha(Vm)
beta(Vm)
tau_n = 1/(alphan+betan)+1.0
ninf = 1.0/(1.0+exp((Vm-V0p5n)/(-S0p5n)))
if (celsius >= 37) {
tau_n=tau_n*(1/Q10kdn)
}
}