load_file("nrngui.hoc")
//load_file("layerV1.hoc") //The morphology to use
load_file("layer23_4.hoc") //The morphology to use
startseed=1
runnum=0
insertHH=01
//****EXCITATORY CELLS
numINPUTperCELL=300 //number of presynaptic cells (inputs) to first generation
numINHIBINPUTperCELL=000
objref cell
//***INPUTS
baselineISI=1e100 //frequesncy of basal firing (ms)
patternISI=10 //frequency of pattern firing (ms)
patternNUM=1 //number of pattern APs
patternSTART=10 //10 when pattern starts
patternEND=10//100
patternINHIBISI=100 //frequency of pattern firing (ms)
patternINHIBNUM=1 //number of pattern APs
patternINHIBSTART=100 //when pattern starts
patternINHIBEND=1100
//***ANALYSIS
spikethresh=-35 //min threshold for the NMDA spike
spikeminlen=30 //min duration of NDMA spike
placeterminal=1//puts synapses only on the terminal dends and their parents
numbetween=0//autoset by user selection of specific dendrites
//****SYNAPTIC CONDUCTACES
gnmdamax=00.7
if (runnum>1){gnmdamax=0}
gampamax=0.3//.5
ggabamax=00.5
decayampa_glutamate=1
decaynmda_glutamate=1
n_glutamate=0.2
tau_ampa_glutamate=1
decaytime_gaba=6
//***ACTIVE
na_s=0.5//1//2//.5
k_s=0.05//05//.2//15//0.01
km_s=0//0.03
na_d=0
k_d=0.01////.01
km_d=0//1
gpas=010000
//****OTHER OBJECTS and VARIABLES
objref rLOC,temp,temp2,rLOCINHIB,rTIME,rINHIBTIME,rISI,rINHIBISI//,rLATERAL,rFEEDF,rTIME,rINPUT,
objref ginputs,gVmain,shape,gSPIKE,nil,pc
pc = new ParallelContext()
showdends=0//1
showsoma=1
randomseed=startseed
syncorr=01
//****PROCEDURES
tstop = 60//1500//200
dt = 0.1
v_init = -60
steps_per_ms = 10
load_file("functions.hoc")
initrandom(0)
makecells(0)
active()
objref gVmain
gVmain=new Graph(0)
gVmain.view(0,-60,tstop,60,950,280,500,230)
if(showdends){
forall {//dends
gVmain.addvar("v(0.5)",1,1)
}
}
gVmain.addexpr("cell.soma.v(0.5)",2,1)
graphList[0].append(gVmain)
load_file("net.ses")
init_plots_panels()