COMMENT
//****************************//
// Created by Alon Polsky //
// apmega@yahoo.com //
// 2010 //
//****************************//
ENDCOMMENT
TITLE NMDA synapse with depression
NEURON {
POINT_PROCESS glutamate_old
NONSPECIFIC_CURRENT inmda,iampa
RANGE del,Tspike,Nspike
RANGE e ,local_v,inmda,iampa
RANGE decayampa,decaynmda,dampa,dnmda
RANGE gnmda,gampa
RANGE locx,locy,dend,pos
GLOBAL n, gama,tau_ampa,taudampa,taudnmda
GLOBAL gampamax,gnmdamax,tau1,tau2
:USEION canmda WRITE icanmda VALENCE 2
USEION ca WRITE ica
GLOBAL icaconst
GLOBAL Voff,Vset
}
UNITS {
(nA) = (nanoamp)
(mV) = (millivolt)
(nS) = (nanomho)
(mM) = (milli/liter)
F = 96480 (coul)
R = 8.314 (volt-coul/degC)
PI = (pi) (1)
(mA) = (milliamp)
(um) = (micron)
}
PARAMETER {
icaconst =0.1
gnmdamax=1 (nS)
gampamax=1 (nS)
e= 0.0 (mV)
tau1=50 (ms)
tau2=2 (ms)
tau_ampa=1 (ms)
n=0.25 (/mM)
gama=0.08 (/mV)
dt (ms)
v (mV)
del=30 (ms)
Tspike=10 (ms)
Nspike=1
decayampa=1:.5
decaynmda=1:.5
taudampa=200 (ms):tau decay
taudnmda=200 (ms):tau decay
dend=0
pos=0
Voff=0 :0 - voltage dependent 1- voltage independent
Vset=-60 :set voltage when voltage independent
}
ASSIGNED {
inmda (nA)
iampa (nA)
gnmda (nS)
local_v (mV):local voltage
:icanmda (nA)
ica (nA)
}
STATE {
A (nS)
B (nS)
gampa (nS)
dampa
dnmda
}
INITIAL {
gnmda=0
gampa=0
A=0
B=0
dampa=1
dnmda=1
:icanmda=0
}
BREAKPOINT {
LOCAL count
SOLVE state METHOD cnexp
FROM count=0 TO Nspike-1 {
IF(at_time(count*Tspike+del)){
state_discontinuity( A, A+ gnmdamax*(dnmda))
state_discontinuity( B, B+ gnmdamax*(dnmda))
state_discontinuity( gampa, gampa+ gampamax*dampa)
state_discontinuity( dampa, dampa* decayampa)
state_discontinuity( dnmda, dnmda* decaynmda)
}
}
local_v=v*(1-Voff)+Vset*Voff
gnmda=(A-B)/(1+n*exp(-gama*local_v) )
inmda =(1e-3)* gnmda * (v-e)
iampa= (1e-3)*gampa* (v- e)
local_v=v
:icanmda=inmda/10
ica=inmda*0.1/(PI*diam)*icaconst
inmda=inmda*.9
}
DERIVATIVE state {
A'=-A/tau1
B'=-B/tau2
gampa'=-gampa/tau_ampa
dampa'=(1-dampa)/taudampa
dnmda'=(1-dnmda)/taudnmda
}