BACK_GROUND = 0 // set to 1 when using background synapses
synch = 0 // synapses are stimulated randomly (NOT synchronously), set to 1 for synchronous stimulation
load_file("nrngui.hoc")
load_file("./../template/ExperimentControl.hoc") // load needed templates
load_file("./../template/RangeRef.hoc")
load_file("./../template/ObliquePath.hoc")
load_file("./../template/BasalPath.hoc")
cvode_active(0) //activate Cvode
objref econ // initialize template parameters
show_errs=1
debug_lev=1
econ=new ExperimentControl(show_errs,debug_lev)
econ.self_define(econ)
econ.morphology_dir="./../morphology/n123" // set location for morphology files
econ.add_lib_dir("Terrence","./../lib") // set location for library files
econ.generic_dir="./../experiment/" // set
strdef tips_dir
system(econ.syscmd)
actual_resolution=75 // maximum nseg number, lib/chooses-secs.hoc
desired_resolution=1
xopen("./../morphology/n123/cell.hoc") // load raw cell morphology
xopen("./../morphology/n123/cell-analysis.hoc") // load user-defined semantics on morphology
cell_analysis(econ)
printf("Opening cell setup\n")
xopen("./cell-setup.hoc") // load cell-setup
printf("Opened. Setting up cell\n") // specify all mechanisms,
maximum_segment_length=actual_resolution // membrane properties etc
cell_setup(econ)