TITLE calcium pump
NEURON {
SUFFIX capump
USEION ca READ cai WRITE ica
RANGE ica
GLOBAL Vmax, Km, hill, Vconv, carest
}
UNITS {
(mA) = (milliamp)
(mV) = (millivolt)
FARADAY = (faraday) (coulombs)
}
PARAMETER {
Vmax = 352 (uM/s) :Units of Borgdorff
vol_surf_ratio = 3.75 (um) :diam/4
Km = .0069 (mM) :6.9 uM
hill = 1 :hill is 1.1, no significant diff from 1
scale = 1e-4
}
ASSIGNED {
ica (mA/cm2)
cai (mM)
Vconv
carest
}
INITIAL {
VERBATIM
cai = _ion_cai;
carest = _ion_cai;
ENDVERBATIM
ica = pumprate(cai)*scale
}
BREAKPOINT {
ica = pumprate(cai)*scale
}
FUNCTION pumprate (ci) {
Vconv = Vmax*vol_surf_ratio*FARADAY*2*(1e-4)
if (fabs(ci-carest) < 1e-7) {
pumprate = (ci-carest)*Vconv/Km
}
else {
pumprate = Vconv/(1+Km/(ci-carest))
}
}