/// {system("pwd")}
/// print "above at very start of parameters.hoc"
breathing_period=400
light_period=200 // 300 is a short run, 398 regular
breath_peak_rate = 200
light1_peak_rate = 60
light2_peak_rate = 0
breath_half_width=30
light_half_width=30
objref pwm
pwm=new PWManager()
pwm.hide(3) // close voltage window for faster run
gc_on=4

///////////////////////////////////////////////////
//turn the ET cells back off for this special case:
// don't turn off pg lateral connections
// nc[19][0].weight = 0 // turns off pg2 axon to m1 priden connection
// nc[25][0].weight = 0 // turns off pg1 axon to m2 priden connection
if (1) { //turn ET cells off (1) or on (0)
  for weight_index = 26, 33 {
    nc[weight_index][0].weight = 0
  }
}
//////////////////////////////////////////////////
// add some extra pg recordings
objref pg1_to_m1tuft_events, pg1_axon_to_m2_events, pg2_axon_to_m1priden_events
pg1_to_m1tuft_events = new Vector()
pg1_axon_to_m2_events = new Vector()
pg2_axon_to_m1priden_events = new Vector()

nc[18][0].record(pg1_to_m1tuft_events)
nc[25][0].record(pg1_axon_to_m2_events)
nc[19][0].record(pg2_axon_to_m1priden_events)
/// print "likely created pg1_to_m1tuft_events: ",pg1_to_m1tuft_events
/// system("pwd")
load_file("../tdt2mat_data.hoc")
/// print "moving up a folder to get out of run_test?"
chdir("..")
do_everything()
// quit()
// net_type full_net