/**************************************************************************
Cmprtmnt.h JJS 8/26/95
modified from CONICAL, the Computational Neuroscience Class Library
A Compartment is an isopotential volume, to which other compartments
may be attached through Links. A Compartment may also have a number
of Channels. The current flow from these objects is balanced against
the current flow through the Compartment membrane, to produce a new
Compartment potential (voltage) in the Step method.
Requires:
VSource -- base class
VSink -- base class
Stepper -- base class
Link.h -- header file for the Link class
**************************************************************************/
#ifndef COMPARTMENT_H
#define COMPARTMENT_H
#include "VSource.h"
#include "VSink.h"
#include "StepperRk4.h"
#include "Math.h"
// declare the Compartment class
class Compartment : public VSource, public VSink, public Stepper
{
public:
Compartment(void);
virtual void Init( const real dt ); // update V[]
virtual void Step( const real dt ); // update V[]
virtual void Stepk1(const real dt); // update of the Runge Kutta k's
virtual void Stepk2(const real dt);
virtual void Stepk3(const real dt);
virtual void Stepk4(const real dt);
virtual real GetV( void ) // get current voltage
{ return V[itsMaster->GetCurIdx()]; }
//Setter
real GetgMax(real dt){
real dtau = tau1-tau2;
return (exp(- tau2 /dtau *log(tau1/tau2)) - exp(-tau1 /dtau *log(tau1/tau2)))*dt/dtau ;
}
// public variables (function parameters)
real tau1, tau2, gMax; // time constants and maximum of function alpha
/**** public variables: feel free to read or set these between steps! ****/
real Gm; // membrane conductance (siemens)
real EGm; // reversal potential times Gm (volt seimens, or amps)
real Cm; // negative of the membrane capacitance (farads)
real P,P0;
real EI;
real X,GI, gMaxI, MaxGI;
real Vk1, Vk2, Vk3, Vk4; //voltages at each step of the RK4 method
protected:
};
#endif