TITLE T-type calcium channel (Cav3.2)
UNITS {
(mV) = (millivolt)
(mA) = (milliamp)
(S) = (siemens)
(molar) = (1/liter)
(mM) = (millimolar)
FARADAY = (faraday) (coulomb)
R = (k-mole) (joule/degC)
}
NEURON {
SUFFIX cav32
USEION ca READ cai, cao WRITE ica VALENCE 2
RANGE pbar, icat, a, perm
}
PARAMETER {
pbar = 6.7e-6 (cm/s)
mvhalf = -61.5 (mV)
mslope = -8.0 (mV)
hvhalf = -73.7 (mV)
hslope = 9.1 (mV) :9.1
a = 0.9
}
ASSIGNED {
v (mV)
ica (mA/cm2)
eca (mV)
celsius (degC)
cai (mM)
cao (mM)
minf
hinf
mtau (ms)
htau (ms)
htau2 (ms)
htot (ms)
perm
}
STATE { m h }
BREAKPOINT {
SOLVE states METHOD cnexp
perm = pbar*m*m*m*h
ica = ghk(v, cai, cao)*perm
}
INITIAL {
rates(v)
m = minf
h = hinf
}
DERIVATIVE states {
rates(v)
m' = (minf-m)/mtau
h' = (hinf-h)/htot
}
PROCEDURE rates(v (mV)) {
minf = 1/(1+exp((v-mvhalf)/mslope))
hinf = 1/(1+exp((v-hvhalf)/hslope))
mtau = 6.0/(1+exp((v+66.0)/15.0 ))+0.6
htau = 4.3/(1+exp(0.06*(v)))+8
htau2 = 95*exp(-(v+58.0)/25.0)+20
htot = a*htau + (1-a)*htau2
}
FUNCTION ghk(v (mV), ci (mM), co (mM)) (.001 coul/cm3) {
LOCAL z, eci, eco
z = (1e-3)*2*FARADAY*v/(R*(celsius+273.15))
if(z == 0) {
z = z+1e-6
}
eco = co*(z)/(exp(z)-1)
eci = ci*(-z)/(exp(-z)-1)
ghk = (1e-3)*2*FARADAY*(eci-eco)
}
COMMENT
Original data by Iftinca (2006) , rat, 37 C.
Genesis implementation by Kai Du (21 C) <kaidu828@gmail.com> m^2*h.
NEURON implementation by Alexander Kozlov <akozlov@nada.kth.se>, smooth
fit of mtau and htau.
Revised NEURON model by Robert Lindroos
-> 37 C (kinetics and infinity parameters)
-> Half activation and slope factors were found that approximated the activation curve
from the paper when cubed (m3). m3 were used in order to remove the large current
obtained when stepping back to holding potential (-110 mV), at the end of the trace.
-> slow and fast inactivation was approximated from the paper and combined as
tauh = 0.9 * fast + 0.1 * slow. Activation kinetics was also extracted from paper.
ENDCOMMENT