objectvar save_window_, rvp_
objectvar scene_vector_[5]
objectvar ocbox_, ocbox_list_, scene_, scene_list_
{ocbox_list_ = new List()  scene_list_ = new List()}

//Begin I/V Clamp Electrode
{
load_file("electrod.hoc")
}
{
ocbox_=new Electrode(0)
execute("can_locate=1 sec=\"axon\" xloc=1 locate(0)", ocbox_)
execute("vc.dur[0]=0.1 vc.amp[0]=-65", ocbox_)
execute("vc.dur[1]=5 vc.amp[1]=10", ocbox_)
execute("vc.dur[2]=100 vc.amp[2]=-65", ocbox_)
execute("stim.del=0 stim.dur=0.5 stim.amp=9", ocbox_)
execute("vcsteps=5", ocbox_)
execute("samp=stim.amp  store_vclamp() glyph()", ocbox_)
ocbox_ = ocbox_.v1
ocbox_.map("I/V Clamp Electrode", 957, 19, 224.25, 371.25)
}
objref ocbox_
//End I/V Clamp Electrode


//Begin I/V Clamp Electrode
{
load_file("electrod.hoc")
}
{
ocbox_=new Electrode(0)
execute("can_locate=1 sec=\"soma\" xloc=0.5 locate(0)", ocbox_)
execute("vc.dur[0]=0.1 vc.amp[0]=-65", ocbox_)
execute("vc.dur[1]=5 vc.amp[1]=10", ocbox_)
execute("vc.dur[2]=100 vc.amp[2]=-65", ocbox_)
execute("stim.del=0 stim.dur=17 stim.amp=0", ocbox_)
execute("vcsteps=5", ocbox_)
execute("samp=stim.amp  store_vclamp() glyph()", ocbox_)
ocbox_ = ocbox_.v1
ocbox_.map("I/V Clamp Electrode", 819, 19, 224.25, 371.25)
}
objref ocbox_
//End I/V Clamp Electrode

{
xpanel("NEURON Main Panel", 0)
xcheckbox("Quiet",&stdrun_quiet,"")
realtime = 1
xvalue("Real Time","realtime", 0,"", 0, 1 )
celsius = 20.3
xvalue("celsius","celsius", 1,"", 0, 1 )
global_ra = 80
xvalue("Axial Resistivity","global_ra", 1,"set_ra()", 1, 1 )
xbutton("RunControl","nrncontrolmenu()")
xmenu("New Graph", 0)
xbutton("Voltage axis","newPlotV()")
xbutton("Current axis","newPlotI()")
xbutton("State axis","newPlotS()")
xbutton("Shape plot","newshapeplot()")
xbutton("Vector movie","newvectorplot()")
xbutton("Phase Plane","newphaseplane()")
xbutton("Grapher","load_proc(\"makegrapher\") makegrapher()")
xmenu()
xmenu("Point Processes", 0)
xmenu("Managers", 0)
xbutton("Point Manager","load_template(\"PointProcessManager\") makeppm()")
xbutton("Point Group","load_template(\"PointProcessGroupManager\") makeppgm()")
xbutton("Electrode","load_proc(\"makeelectrode\") makeelectrode()")
xmenu()
xmenu("Viewers", 0)
xmenu("PointProcesses", 0)
xbutton("IClamp","makePointBrowser(\"IClamp\")")
xbutton("AlphaSynapse","makePointBrowser(\"AlphaSynapse\")")
xbutton("SEClamp","makePointBrowser(\"SEClamp\")")
xbutton("VClamp","makePointBrowser(\"VClamp\")")
xbutton("APCount","makePointBrowser(\"APCount\")")
xmenu()
xmenu()
xmenu()
xmenu("Distributed Mechanisms", 0)
xmenu("Managers", 0)
xbutton("Inserter","load_template(\"Inserter\") makeinserter()")
xbutton("Homogeneous Spec","load_proc(\"makeshowmechanism\") makeshowmechanism()")
xmenu()
xmenu("Viewers", 0)
xbutton("Shape Name","load_template(\"MenuExplore\") makeMenuExplore()")
xbutton("Name Values","nrnallsectionmenu()")
xmenu("Mechanisms (Globals)", 0)
xbutton("na_ion","nrnglobalmechmenu(\"na_ion\")")
xbutton("k_ion","nrnglobalmechmenu(\"k_ion\")")
xbutton("hh","nrnglobalmechmenu(\"hh\")")
xmenu()
xmenu()
xmenu()
xmenu("Miscellaneous", 0)
xmenu("Clipboard", 0)
xbutton("Save to File","load_proc(\"clipboard_save\") clipboard_save()")
xbutton("Retrieve from File","load_proc(\"clipboard_retrieve\") clipboard_retrieve()")
xmenu()
xbutton("Family","load_template(\"Family\") makeFamily()")
xbutton("Parameterized Function","load_template(\"FunctionFitter\") makefitter()")
xbutton("Run Fitter","load_template(\"RunFitter\") makerunfitter()")
xmenu("Impedance", 0)
xbutton("Frequency","load_template(\"ImpedanceRatio\") makeImpRatio()")
xbutton("Path","load_template(\"Impx\") makeImpx()")
xbutton("log(A) vs x","load_template(\"LogAvsX\") makelogax()")
xbutton("Shape","load_template(\"ImpShape\") makeImpShape()")
xmenu()
xmenu()
xpanel(25,217)
}
{
xpanel("soma(0 - 1) (Parameters)", 0)
xlabel("soma(0 - 1) (Parameters)")
xlabel("nseg = 1")
soma.L = 60
xvalue("L","soma.L", 1,"define_shape()", 0, 0 )
soma.diam = 60
xvalue("diam","soma.diam", 1,"", 0, 0 )
soma.cm = 1
xvalue("cm","soma.cm", 1,"", 0, 0 )
soma.gnabar_B_Na = 0
xvalue("gnabar_B_Na","soma.gnabar_B_Na", 1,"", 0, 0 )
soma.ena = 53
xvalue("ena","soma.ena", 1,"", 0, 0 )
soma.gkbar_B_A = 0
xvalue("gkbar_B_A","soma.gkbar_B_A", 1,"", 0, 0 )
soma.gkbar_B_DR = 0
xvalue("gkbar_B_DR","soma.gkbar_B_DR", 1,"", 0, 0 )
soma.ek = -84
xvalue("ek","soma.ek", 1,"", 0, 0 )
soma.g_pas = 0.0045
xvalue("g_pas","soma.g_pas", 1,"", 0, 0 )
soma.e_pas = -80
xvalue("e_pas","soma.e_pas", 1,"", 0, 0 )
xpanel(305,540)
}
{
xpanel("RunControl", 0)
v_init = -80
xvalue("Init","v_init", 1,"stdinit()", 1, 1 )
xbutton("Init & Run","run()")
xbutton("Stop","stoprun=1")
runStopAt = 5
xvalue("Continue til","runStopAt", 1,"{continuerun(runStopAt) stoprun=1}", 1, 1 )
runStopIn = 1
xvalue("Continue for","runStopIn", 1,"{continuerun(t + runStopIn) stoprun=1}", 1, 1 )
xbutton("Single Step","steprun()")
t = 4
xvalue("t","t", 2 )
tstop = 4
xvalue("Tstop","tstop", 1,"tstop_changed()", 0, 1 )
dt = 0.01
xvalue("dt","dt", 1,"setdt()", 0, 1 )
steps_per_ms = 100
xvalue("Points plotted/ms","steps_per_ms", 1,"setdt()", 0, 1 )
xpanel(440,389)
}
{
xpanel("hillock(0 - 1) (Parameters)", 0)
xlabel("hillock(0 - 1) (Parameters)")
xlabel("nseg = 10")
hillock.L = 15
xvalue("L","hillock.L", 1,"define_shape()", 0, 0 )
hillock.cm = 1
xvalue("cm","hillock.cm", 1,"", 0, 0 )
xlabel("diam is not constant")
hillock.gnabar_B_Na = 4.8
xvalue("gnabar_B_Na","hillock.gnabar_B_Na", 1,"", 0, 0 )
hillock.ena = 53
xvalue("ena","hillock.ena", 1,"", 0, 0 )
hillock.gkbar_B_A = 0
xvalue("gkbar_B_A","hillock.gkbar_B_A", 1,"", 0, 0 )
hillock.gkbar_B_DR = 0.8
xvalue("gkbar_B_DR","hillock.gkbar_B_DR", 1,"", 0, 0 )
hillock.ek = -84
xvalue("ek","hillock.ek", 1,"", 0, 0 )
hillock.g_pas = 0.0045
xvalue("g_pas","hillock.g_pas", 1,"", 0, 0 )
hillock.e_pas = -80
xvalue("e_pas","hillock.e_pas", 1,"", 0, 0 )
xpanel(631,545)
}
{
xpanel("axon(0 - 1) (Parameters)", 0)
xlabel("axon(0 - 1) (Parameters)")
xlabel("nseg = 20")
axon.L = 30
xvalue("L","axon.L", 1,"define_shape()", 0, 0 )
axon.cm = 1
xvalue("cm","axon.cm", 1,"", 0, 0 )
axon.diam = 3.5
xvalue("diam","axon.diam", 1,"", 0, 0 )
axon.gnabar_B_Na = 4.8
xvalue("gnabar_B_Na","axon.gnabar_B_Na", 1,"", 0, 0 )
axon.ena = 53
xvalue("ena","axon.ena", 1,"", 0, 0 )
axon.gkbar_B_A = 0
xvalue("gkbar_B_A","axon.gkbar_B_A", 1,"", 0, 0 )
axon.gkbar_B_DR = 0.8
xvalue("gkbar_B_DR","axon.gkbar_B_DR", 1,"", 0, 0 )
axon.ek = -84
xvalue("ek","axon.ek", 1,"", 0, 0 )
axon.g_pas = 0.0045
xvalue("g_pas","axon.g_pas", 1,"", 0, 0 )
axon.e_pas = -80
xvalue("e_pas","axon.e_pas", 1,"", 0, 0 )
xpanel(948,533)
}
{
xpanel("dend[0](0 - 1) (Parameters)", 0)
xlabel("dend[0](0 - 1) (Parameters)")
xlabel("nseg = 20")
dend[0].L = 7000
xvalue("L","dend[0].L", 1,"define_shape()", 0, 0 )
dend[0].cm = 1
xvalue("cm","dend[0].cm", 1,"", 0, 0 )
xlabel("diam is not constant")
dend[0].gnabar_B_Na = 0
xvalue("gnabar_B_Na","dend[0].gnabar_B_Na", 1,"", 0, 0 )
dend[0].ena = 53
xvalue("ena","dend[0].ena", 1,"", 0, 0 )
dend[0].gkbar_B_DR = 0
xvalue("gkbar_B_DR","dend[0].gkbar_B_DR", 1,"", 0, 0 )
dend[0].ek = -84
xvalue("ek","dend[0].ek", 1,"", 0, 0 )
dend[0].g_pas = 0.00014
xvalue("g_pas","dend[0].g_pas", 1,"", 0, 0 )
dend[0].e_pas = -80
xvalue("e_pas","dend[0].e_pas", 1,"", 0, 0 )
xpanel(8,567)
}
{
save_window_ = new Graph(0)
save_window_.size(0,4,-80,40)
scene_vector_[4] = save_window_
{save_window_.view(0, -80, 4, 120, 387, 10, 309, 217)}
graphList[0].append(save_window_)
save_window_.save_name("graphList[0].")
save_window_.addexpr("hillock.v(0.5)", 1, 1, 0.732771, 0.855112, 2)
save_window_.addexpr("hillock.v(1.0)", 1, 1, 0.737791, 1.0197, 2)
save_window_.addexpr("axon.v(0.2)", 2, 1, 0.755183, 0.567082, 2)
save_window_.addexpr("soma.v(0.5)", 2, 1, 0.745278, 0.933666, 2)
save_window_.addexpr("axon.v(0.1)", 2, 1, 0.762728, 0.578304, 2)
save_window_.addexpr("axon.v(0.3)", 1, 1, 0.761929, 0.832668, 2)
}
objectvar scene_vector_[1]
{doNotify()}