from common import *
import params
import util
import parrun
import weightsave
import vrecord as vr
import net_mitral_centric as nmc
def build_part_model(gloms, mitrals, dicfile=''):
model = getmodel()
model.clear()
# gids
gids = set()
for glomid in gloms:
gids.update(range(glomid * params.Nmitral_per_glom, (glomid+1) * params.Nmitral_per_glom))
gids.update(mitrals)
# distribute
nmc.build_net_round_robin(model, gids, dicfile)
build_model()
def build_complete_model(dicfile=''):
build_part_model(range(params.Ngloms), [], dicfile)
def build_model():
import distribute
import multisplit_distrib
multisplit_distrib.multisplit_distrib(distribute.getmodel())
# set initial weights
if len(params.initial_weights) > 0:
weightsave.weight_load(params.initial_weights)
# print sections
nc = h.List("NetCon")
nc = int(pc.allreduce(nc.count(),1))
if rank == 0: print "NetCon count = ", nc
nseg = 0
for sec in h.allsec():
nseg += sec.nseg
nseg = int(pc.allreduce(nseg, 1))
if rank == 0: print "Total # compartments = ", nseg
pc.spike_record(-1, parrun.spikevec, parrun.idvec)
util.show_progress(200)
from odorstim import OdorSequence
odseq = OdorSequence(params.odor_sequence)
# record
for rec in params.sec2rec:
vr.record(*rec)
if rank == 0: print 'total setup time ', h.startsw()-startsw
h("proc setdt(){}")
h.dt = 1./64. + 1./128.
def run():
parrun.prun(params.tstop)
weightsave.weight_file(params.filename + '.weight.dat')
vr.out()
util.finish()