import readconffile as rcf
filename2=''
def getColumns(inFile, delim="\t", header=True):
cols = {}
indexToName = {}
for lineNum, line in enumerate(inFile):
if lineNum == 0:
headings = line.split(delim)
i = 0
for heading in headings:
heading = heading.strip()
if header:
cols[heading] = []
indexToName[i] = heading
else:
cols[i] = [heading]
indexToName[i] = i
i += 1
else:
cells = line.split(delim)
i = 0
for cell in cells:
cell = cell.strip()
cols[indexToName[i]] += [cell]
i += 1
return cols, indexToName
def readexpfile(num=0):
[inputfilename,modfilename,parametersfilename,flagdata,flagcut,nrtraces,Vrestf,esynf,nrparamsfit,paramnr,paramname,paraminitval,paramsconstraints,nrdepnotfit,depnotfit,nrdepfit,depfit,seedinitvaluef]=rcf.readconffile()
times = []
currents = []
data=open(filename2,'r')
cols, indexToName = getColumns(data,header=False)
if (flagdata==0):
vecc=cols[0]
timevecprov = []
for elem in vecc:
if elem:
timevecprov.append(float(elem))
vecc2=cols[num]
vecallprov = []
for elem in vecc2:
if elem:
vecallprov.append(float(elem))
else:
vecc=cols[2*num]
timevecprov = []
for elem in vecc:
if elem:
timevecprov.append(float(elem))
vecc2=cols[2*num+1]
vecallprov = []
for elem in vecc2:
if elem:
vecallprov.append(float(elem))
return (timevecprov,vecallprov)