#!/bin/bash #SBATCH --time=10:00:00 #SBATCH --ntasks=1 #SBATCH --cpus-per-task=1 #SBATCH --mem=64g #SBATCH --partition=norm # This script is for removing KCs from dataset with specified JID and creating a template set -e source $HOME/miniconda2/etc/profile.d/conda.sh # DATA_DIR='/data/rays3/ggn/fixed_net' # TEMPLATE_DIR='/data/rays3/ggn/fixed_net_templates' GGNDIR=$HOME/projects/ggn SLURMDIR=$HOME/projects/ggn/mb/slurm/circular_run # set PATH="$PATH":$HOME/miniconda2/condabin:$HOME/miniconda2/bin conda deactivate conda activate py3 echo `which python` pushd $GGNDIR/mb OLD_PYTHONPATH=$PYTHONPATH export PYTHONPATH=$PYTHONPATH:$GGNDIR/analysis echo "$SLURM_JOB_ID: removing KCs for args $*" echo "PYTHONPATH=$PYTHONPATH" time python $SLURMDIR/remove_high_firing_kcs.py $* conda deactivate popd export PYTHONPATH=OLD_PYTHONPATH