from __future__ import print_function, division
import numpy as np
from matplotlib import pyplot as plt
from moose_nerp.prototypes.util import neurontypes
def spineFig(model,spinecatab,spinevmtab,simtime):
f=plt.figure()
f.canvas.set_window_title('Spines')
t = np.linspace(0, simtime, len(spinevmtab[0][0].vector))
if model.calYN:
plt.subplot(211)
for neurnum in range(len(neurontypes(model.param_cond))):
for oid in spinevmtab[neurnum]:
#find()-2 removes Vm from name, split and join removes dend from name
name = ''.join(oid.name[oid.name.find('_')-2:].split('dend'))
plt.plot(t,oid.vector,label=name)
plt.ylabel('Vm')
if model.calYN:
plt.subplot(212)
for neurnum in range(len(neurontypes(model.param_cond))):
for oid in spinecatab[neurnum]:
name=''.join(oid.name[oid.name.find('_')-2:].split('dend'))
plt.plot(t,1000*oid.vector,label=name)
plt.ylabel('calcium, uM')
plt.legend()
plt.show()