//****************************************************************************
// basic_procs.hoc defines procedures for setting conductances and range
// variables of channels - these are primarily used to change variables
// from the gui
proc set_pas() { NEW_GPAS = $1
forall if (ismembrane("pas")) {g_pas = NEW_GPAS}
nG_PAS = NEW_GPAS
}
//*****************
// Sodium conductance settings
proc set_naf() { NEW_GBAR = $1
nG_NAF = NEW_GBAR
forsec "soma" {gnabar_naf = nG_NAF}
}
proc set_nafd() { NEW_GBAR = $1
nG_NAFD = NEW_GBAR
forsec "dend.*" {gnabar_naf = nG_NAFD}
}
proc set_nap() { NEW_GBAR = $1
nG_NAP = NEW_GBAR
forsec "soma" {gnabar_nap = nG_NAP}
}
proc set_napd() { NEW_GBAR = $1
nG_NAPD = NEW_GBAR
forsec "dend.*" {gnabar_nap = nG_NAPD}
}
//*****************
//*****************
// Potassium conductance settings
proc set_ek() { newEK = $1
forsec "MSP" {ek = newEK}
EK = newEK
}
proc set_kir() { NEW_GBAR = $1
nG_KIR = NEW_GBAR
forall if (ismembrane("kir")) {gkbar_kir = nG_KIR}
}
proc set_kas() { NEW_GBAR = $1
nG_KAS = NEW_GBAR
forsec "soma" {gkbar_kas = nG_KAS}
MSP_Cell[0].dend1 gkbar_kas = nG_KAS
MSP_Cell[0].dend2 gkbar_kas = nG_KAS
MSP_Cell[0].dend3 gkbar_kas = nG_KAS
MSP_Cell[0].dend4 gkbar_kas = nG_KAS
}
proc set_kasd() { NEW_GBAR = $1
nG_KASD = NEW_GBAR
forsec "dend._.*" {gkbar_kas = nG_KASD}
}
proc set_kaf() { NEW_GBAR = $1
nG_KAF = NEW_GBAR
forsec "soma" {gkbar_kaf = nG_KAF}
MSP_Cell[0].dend1 gkbar_kaf = nG_KAF
MSP_Cell[0].dend2 gkbar_kaf = nG_KAF
MSP_Cell[0].dend3 gkbar_kaf = nG_KAF
MSP_Cell[0].dend4 gkbar_kaf = nG_KAF
}
proc set_kafd() { NEW_GBAR = $1
nG_KAFD = NEW_GBAR
forsec "dend._.*" {gkbar_kaf = nG_KAFD}
}
proc set_krp() { NEW_GBAR = $1
nG_KRP = NEW_GBAR
forall if (ismembrane("krp")) {gkbar_krp = NEW_GBAR}
}
proc set_bkkca() { NEW_GBAR = $1
nG_BKKCA = NEW_GBAR
forall if(ismembrane("bkkca")) {gkbar_bkkca = NEW_GBAR}
}
proc set_skkca() { NEW_GBAR = $1
nG_SKKCA = NEW_GBAR
forall if(ismembrane("skkca")) {gkbar_skkca = NEW_GBAR}
}
//*****************
//******************
// Calcium conductance settings
proc set_caL() { NEW_PBAR = $1
nP_CAL = NEW_PBAR
forall if (ismembrane("caL")) {pbar_caL = NEW_PBAR}
}
proc set_caL13() { NEW_PBAR = $1
nP_CAL13 = NEW_PBAR
forall if (ismembrane("caL13")) {pcaLbar_caL13 = NEW_PBAR}
}
proc set_can() { NEW_PBAR = $1
nP_CAN = NEW_PBAR
forall if (ismembrane("can")) {pbar_can = NEW_PBAR}
}
proc set_caq() { NEW_PBAR = $1
nP_CAQ = NEW_PBAR
forall if (ismembrane("caq")) {pcaqbar_caq = NEW_PBAR}
}
proc set_car() { NEW_PBAR = $1
nP_CAR = NEW_PBAR
forall if (ismembrane("car")) {pcarbar_car = NEW_PBAR}
}
proc set_cat() { NEW_PBAR = $1
nP_CAT = NEW_PBAR
forall if (ismembrane("cat")) {pcatbar_cat = NEW_PBAR}
}
//******************
//******************
// Calcium dynamics procs
proc set_cainf() { NEW_CAINF = $1
nCA_INF = NEW_CAINF
forall if (ismembrane("cadyn")) {cainf_cadyn = NEW_CAINF}
forall if (ismembrane("caldyn")) {cainf_caldyn = NEW_CAINF}
}
proc set_taur() { NEW_TAUR = $1
nCA_TAUR = NEW_TAUR
forall if (ismembrane("cadyn")) {taur_cadyn = NEW_TAUR}
forall if (ismembrane("caldyn")) {taur_caldyn = NEW_TAUR}
}
proc set_cadrive() { NEW_DRIVE = $1
nCA_DRIVE = NEW_DRIVE
forall if (ismembrane("cadyn")) {drive_cadyn = NEW_DRIVE}
forall if (ismembrane("caldyn")) {drive_caldyn = NEW_DRIVE}
}
proc set_pump() { NEW_PUMP = $1
nCA_PUMP = NEW_PUMP
forall if (ismembrane("cadyn")) {pump_cadyn = NEW_PUMP}
forall if (ismembrane("caldyn")) {pump_caldyn = NEW_PUMP}
}
//******************
//******************
// synaptic gbar procs
proc gampa() { NEW = $1 // AMPA conductance
nG_AMPA = NEW
for j = 0, NGLU-1 {AMPA[j].gbar = NEW}
}
proc gnmda() { NEW = $1 // NMDA conductance
nG_NMDA = NEW
for j = 0, NGLU-1 {NMDA[j].gbar = NEW}
}
proc ggaba() { NEW = $1 // GABA conductance
nG_GABA = NEW
for j = 0, NGABA-1 {GABA[j].gbar = nG_GABA}
}
//******************
//******************
// netstim variables
proc tstart() { NEW = $1 // time of netstims to start spiking
nT_START = NEW
for i = 0, NSYN-1 {NS_NetStim[i].pp.start = NEW}
}
proc setnetn() { NEW = $1 // number of times a netstim will spike
nNET_N = NEW
for i = 0, NSYN-1 { NS_NetStim[i].pp.number = nNET_N }
}
proc setnoise() { NEW = $1 // netstim noise - 1 = random, 0 = not
nNOISE = NEW
for i = 0, NSYN-1 { NS_NetStim[i].pp.noise = nNOISE }
}
//******************