<?xml version="1.0" encoding="UTF-8"?> <neuroml xmlns="http://morphml.org/neuroml/schema" xmlns:meta="http://morphml.org/metadata/schema" xmlns:mml="http://morphml.org/morphml/schema" xmlns:bio="http://morphml.org/biophysics/schema" xmlns:cml="http://morphml.org/channelml/schema" xmlns:net="http://morphml.org/networkml/schema" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://morphml.org/neuroml/schema NeuroML.xsd" lengthUnits="micron"> <cells> <cell name="SampleCell"> <meta:notes>A Simple cell for testing purposes</meta:notes> <mml:segments> <mml:segment id="0" name="Soma" cable="0"> <mml:proximal x="0.0" y="0.0" z="0.0" diameter="16.0"/> <mml:distal x="0.0" y="0.0" z="0.0" diameter="16.0"/> </mml:segment> <mml:segment id="1" name="mainDend" parent="0" cable="1"> <mml:proximal x="0.0" y="0.0" z="0.0" diameter="2.0"/> <mml:distal x="20.0" y="0.0" z="0.0" diameter="2.0"/> </mml:segment> <mml:segment id="2" name="subDend1" parent="1" cable="2"> <mml:proximal x="20.0" y="0.0" z="0.0" diameter="2.0"/> <mml:distal x="40.0" y="15.0" z="0.0" diameter="2.0"/> </mml:segment> <mml:segment id="3" name="subDend2" parent="1" cable="3"> <mml:proximal x="20.0" y="0.0" z="0.0" diameter="2.0"/> <mml:distal x="45.0" y="0.0" z="0.0" diameter="2.0"/> </mml:segment> <mml:segment id="4" name="subDend3" parent="1" cable="4"> <mml:proximal x="20.0" y="0.0" z="0.0" diameter="2.0"/> <mml:distal x="40.0" y="-15.0" z="0.0" diameter="2.0"/> </mml:segment> <mml:segment id="5" name="mainAxon" parent="0" cable="5"> <mml:proximal x="0.0" y="0.0" z="0.0" diameter="1.0"/> <mml:distal x="-30.0" y="0.0" z="0.0" diameter="1.0"/> </mml:segment> </mml:segments> <mml:cables> <mml:cable id="0" name="Soma"> <meta:group>all</meta:group> <meta:group>soma_group</meta:group> </mml:cable> <mml:cable id="1" name="mainDendSec" fract_along_parent="0.5"> <meta:group>all</meta:group> <meta:group>dendrite_group</meta:group> </mml:cable> <mml:cable id="2" name="subDendSec1"> <meta:group>all</meta:group> <meta:group>dendrite_group</meta:group> </mml:cable> <mml:cable id="3" name="subDendSec2"> <meta:group>all</meta:group> <meta:group>dendrite_group</meta:group> </mml:cable> <mml:cable id="4" name="subDendSec3"> <meta:group>all</meta:group> <meta:group>dendrite_group</meta:group> </mml:cable> <mml:cable id="5" name="mainAxonSec" fract_along_parent="0.5"> <meta:group>all</meta:group> <meta:group>axon_group</meta:group> </mml:cable> </mml:cables> <!--Adding the biophysical parameters--> <biophysics units="Physiological Units"> <!-- <bio:mechanism name="NaConductance" type="Channel Mechanism"> <bio:parameter name="gmax" value="120.0"> <bio:group>all</bio:group> </bio:parameter> </bio:mechanism> <bio:mechanism name="KConductance" type="Channel Mechanism"> <bio:parameter name="gmax" value="36.0"> <bio:group>all</bio:group> </bio:parameter> </bio:mechanism> --> <bio:mechanism name="pas" type="Channel Mechanism" passive_conductance="true"> <bio:parameter name="e" value="-54.3"> <bio:group>all</bio:group> </bio:parameter> <bio:parameter name="gmax" value="0.3"> <bio:group>all</bio:group> </bio:parameter> </bio:mechanism> <bio:spec_capacitance> <bio:parameter value="1.1"> <bio:group>all</bio:group> </bio:parameter> </bio:spec_capacitance> <bio:spec_axial_resistance> <bio:parameter value="0.03"> <bio:group>all</bio:group> </bio:parameter> </bio:spec_axial_resistance> <bio:init_memb_potential> <bio:parameter value="-65.0"> <bio:group>all</bio:group> </bio:parameter> </bio:init_memb_potential> </biophysics> <connectivity> <net:potential_syn_loc synapse_type="DoubExpSyn"> <net:group>all</net:group> </net:potential_syn_loc> </connectivity> </cell> </cells></neuroml>