NeuroML2 description of a reduced-morphology layer V pyramidal cell. Christoph Metzner & Tuomo Mäki-Marttunen, 2015-2016 Files included in the NeuroML2 implementation: CaDynamics_E2_NML2.nml #Ca2+ dynamics nml file CaDynamics_E2_NML2_apicTrunk.nml #Ca2+ dynamics (using parameters for # the apical trunk) nml file CaDynamics_E2_NML2_apicTuft.nml #Ca2+ dynamics (using parameters for # the apical tuft) nml file CaDynamics_E2_NML2_soma.nml #Ca2+ dynamics (using parameters for # the soma) nml file Ca_HVA.channel.nml #High-voltage activated Ca2+ current nml file Ca_LVAst.channel.nml #Low-voltage activated Ca2+ current nml file Ih.channel.nml #HCN channel current nml file Im.channel.nml #Muscarinic K+ current nml file K_Pst.channel.nml #Persistent K+ current nml file K_Tst.channel.nml #Transient K+ current nml file NaTa_t.channel.nml #Transient Na+ current nml file Nap_Et2.channel.nml #Persistent Na+ current nml file SK_E2.channel.nml #SK current nml file SKv3_1.channel.nml #Kv3.1 K+ current nml file pas.channel.nml #Passive current nml file Hay_Cell_Condition1.net.nml #Nml file defining the network (of one neuron) LEMS_RedL5bPyrCellHayEtAl2011-Condition1.xml #LEMS file defining the # stimulus for condition 1 Soma_AllCML.cell.nml #Nml file defining the neuron morphology # and parameters for ion channel # conductances and Ca2+ dynamics The nml files are based on the implementation given in https://github.com/OpenSourceBrain/L5bPyrCellHayEtAl2011