/*----------------------------------------------------------------
%W% %G%
lws9287a.asc translated Tue Dec 17 10:31:33 1996 by ntscable 2.0
source file syntax: Eutectic
output file syntax: CABLE
soma: diameter = 13.9452 um length = 31.6017 um area = 1384.48 um2
23 three-D points; 26 outline points numbered 1-26
outline diameter = 21.7305 um
4 primary neurites
31 branches totaling 4021.17 um in length, 7070.09 um2 in area
1256 tree points translated to 427 segments (1 requested)
Neurites divided into segments of equal dx between adjacent digitized
branch points.
Segment length constrained to be < 10 um.
No. points 1282
No. trees 5
Text NOT ASSIGNED
----------------------------------------------------------------*/
/* create sections */
create soma,\
dend1[1],\
dend2[25],\
dend3[19],\
dend4[13]
/*----------------------------------------------------------------*/
proc geometry() { local i, j
/* soma geometry */
soma {
nseg = 1
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
/* connect primary neurites */
soma connect dend1[0] (0), 0.5
soma connect dend2[0] (0), 0.5
soma connect dend3[0] (0), 0.5
soma connect dend4[0] (0), 0.5
/* neurite geometry*/
for i = 0,0 {
dend1[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,24 {
dend2[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,18 {
dend3[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,12 {
dend4[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
/* branching topology*/
for i = 1,0 {
dend1[fscan()] connect dend1[i] (0), fscan()
}
for i = 1,24 {
dend2[fscan()] connect dend2[i] (0), fscan()
}
for i = 1,18 {
dend3[fscan()] connect dend3[i] (0), fscan()
}
for i = 1,12 {
dend4[fscan()] connect dend4[i] (0), fscan()
}
}
geometry()
SOMA COORDINATES AND DIAMETERS:
23
-1.5 1 0.5 0
-1 1 0.5 3
-0.5 1.875 0.375 4.2573
0 2.25 0.25 4.5277
2 1.5 1 10.05
3.5 0.6875 1.375 13.737
4 0.25 1.625 14.605
5.5 -0.6875 2.75 16.565
6 -0.83333 3 17.591
7 -0.83333 3 18.906
7.5 -0.85714 3 19.518
9.5 -0.78571 3.25 21.713
10.5 -0.38462 3.1731 22.025
12 0.038462 3.8077 21.983
15 0.63462 3.3269 21.794
16 0.25 3.35 20.541
17.5 0 3.75 18.062
19 0.375 4.5 15.052
20.5 0.75 5.25 12.349
21 -1.375 5.0625 7.9106
22.5 -1.75 4.5 5.4083
22.5 -0.75 3.5 2.6926
22.5 0.5 3 0
NEURITE COORDINATES AND DIAMETERS:
20 69
15 6.5 4 6.7
15.5 8 5 4.8
15 9.5 4.5 2.9
14.5 11.5 3 1.8
16 12 5 1.1
15 14 6 1.1
13 15.5 7.5 1.1
11.5 17.5 6.5 1.1
10 19.5 6.5 1
8 21 6.5 0.9
6.5 22.5 5 0.9
5 24.5 5 0.9
2.5 25 6.5 0.6
0.5 26 6.5 0.6
0.5 26 9.5 0.3
-2.5 25.5 9 0.2
-4.5 26.5 11.5 0.2
-6 26 12 0.2
-8 25 12 0.2
-10 24.5 12 0.2
-13 24.5 12 0.2
-15 23.5 12 0.2
-18 23.5 12 0.2
-21.5 24 12 0.2
-24 23.5 12.5 0.2
-26.5 24 9.5 0.2
-29 26 6 0.2
-29.5 28 6 0.2
-31.5 30 4.5 0.2
-32 32.5 0.5 0.2
-34 35.5 1 0.2
-37 39 1 0.2
-38.5 41 0.5 0.2
-40.5 43.5 0.5 0.2
-42.5 47 0.5 0.2
-43 49.5 0.5 0.2
-46 49 0.5 0.2
-47 51 0.5 0.2
-47 53 1 0.2
-49 54.5 1 0.2
-52 57 1 0.2
-52.5 59 1 0.2
-54 60.5 1 0.2
-56.5 62.5 1 0.3
-56.5 64.5 0 0.3
-57.5 66.5 0.5 0.4
-59.5 67 0.5 0.4
-61 68.5 0.5 0.4
-64 70.5 0.5 0.4
-65 72.5 0.5 0.4
-68 74.5 0.5 0.4
-69 79 0.5 0.4
-71.5 78.5 0.5 0.4
-72 80.5 0.5 0.4
-75 81 0.5 0.4
-77.5 84 0.5 0.4
-80.5 83 0.5 0.4
-80.5 86.5 0.5 0.4
-80.5 89 1 0.4
-82 90 1 0.4
-84.5 91.5 1 0.4
-88 94 1 0.4
-89.5 97.5 1 0.4
-91 98.5 1 0.4
-92 100.5 1 0.4
-94 99.5 1 0.4
-95 101 1 0.4
-97.5 104 1 0.4
-100.5 105 1 0.4
3 12
7 0.5 6 3.5
5 -0.5 6 2.4
3 -2 6.5 1.9
1 -3.5 7 1.8
0 -5.5 8.5 1.8
-1.5 -7.5 8.5 2.2
-3 -10 8 2.2
-3 -12 8.5 2
-3.5 -15 8.5 2
-3.5 -17.5 9 2.5
-3.5 -20.5 9 3.5
-3.5 -21.5 9 3.5
5 16
-3.5 -21.5 9 3.5
-1 -23 8.5 1.8
0.5 -26 10 1.9
0.5 -28.5 10 1.7
2 -31 10 1.7
3 -33 10 1.7
2 -37 10 1.6
4 -38.5 10 1.6
5 -41 10 1.6
4.5 -43.5 10.5 1.5
4 -45.5 10.5 1.5
4 -48 11.5 1.5
4.5 -50 12 1.5
4 -52 12.5 1.5
3 -54 11.5 1.5
3.5 -56.5 13 1.5
5 18
3.5 -56.5 13 1.5
5 -59.5 12 1.3
5 -62.5 10.5 1.3
6 -65 11 1.3
6 -67.5 11 1.3
6 -70 11 1.3
5.5 -72 11 1.3
6.5 -76 10.5 1.6
7 -79 11 1.4
8 -82.5 11.5 1.2
8.5 -84.5 12 1.2
7.5 -88 13 1.2
8 -90.5 15 1.2
7.5 -93.5 14.5 1.2
9 -95 14.5 1.2
9.5 -97.5 14.5 1
9.5 -100.5 15.5 1
9 -102 16 1
3 11
9 -102 16 1
12 -101.5 16 0.4
15 -101.5 16 0.3
17 -103.5 18 0.3
18.5 -105 17.5 0.3
21 -105.5 17.5 0.3
23.5 -107 17.5 0.2
25.5 -108 17.5 0.2
27.5 -110.5 17.5 0.2
28.5 -109 17.5 0.2
30.5 -109 17.5 0.2
1 4
9 -102 16 1
7.5 -103 16 0.7
8 -105 16 0.7
7.5 -106 16 0.7
4 16
7.5 -106 16 0.7
9 -110 15.5 0.6
9 -112.5 15 0.6
10 -115 15 0.6
10 -117.5 15 0.5
10 -119.5 16 0.5
8.5 -121 16 0.5
8 -122.5 15.5 0.5
9.5 -125 18 0.5
8.5 -127 19.5 0.4
7.5 -128.5 20 0.4
9 -131 20 0.4
9 -133 18 0.4
7.5 -134 18 0.4
6.5 -135.5 18 0.4
6 -137 18 0.4
1 4
6 -137 18 0.4
7.5 -137 20.5 0.2
8 -137.5 18.5 0.2
8 -137.5 18.5 0.2
9 29
6 -137 18 0.4
7 -138 19.5 0.4
6 -139.5 19.5 0.4
5.5 -140.5 17.5 0.4
4 -142.5 18 0.4
2.5 -143.5 17.5 0.3
1.5 -145.5 16 0.3
2 -148 15 0.3
-0.5 -148.5 15 0.3
-2 -150.5 14.5 0.3
-2.5 -153 15 0.3
-4.5 -157 15 0.3
-5 -161 14.5 0.2
-6 -165.5 14 0.2
-6 -168 14 0.2
-4.5 -173 15.5 0.2
-3 -176 15.5 0.2
-2.5 -178 15 0.2
-2.5 -180.5 15 0.2
-5.5 -181.5 15 0.2
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-14.5 -188 16.5 0.2
-17 -186.5 18 0.2
-19 -187 17.5 0.2
-22 -185.5 18 0.2
-23.5 -186 18.5 0.2
14 39
7.5 -106 16 0.7
6 -107.5 15.5 0.4
1.5 -109.5 15.5 0.4
0.5 -114 15.5 0.4
-2.5 -116 16 0.3
-6.5 -117.5 16 0.3
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-12 -118.5 16 0.3
-14.5 -119 17.5 0.2
-17 -119 17.5 0.2
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-22.5 -119.5 16.5 0.2
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-71.5 -136.5 18.5 0.3
-74.5 -139 18.5 0.2
-78 -139.5 16.5 0.2
-81 -140.5 16.5 0.3
-85.5 -143.5 16.5 0.2
-90.5 -145 16.5 0.2
-92.5 -146 15.5 0.2
-94.5 -146.5 15.5 0.3
-96.5 -148.5 16.5 0.2
-100.5 -151.5 13.5 0.2
-104.5 -151.5 14 0.3
-108 -153 15 0.2
2 6
3.5 -56.5 13 1.5
1.5 -58.5 13.5 0.6
0.5 -61.5 14 0.6
-1.5 -62.5 14 0.6
-4 -63.5 14 0.6
-6 -64.5 15 1
16 51
-6 -64.5 15 1
-7 -67 14.5 0.3
-8 -70.5 15.5 0.3
-9 -74 16.5 0.3
-10 -77 17 0.3
-11.5 -78 17 0.3
-12.5 -81.5 17 0.3
-15 -83 17 0.3
-16 -85 16.5 0.3
-16.5 -87 17 0.3
-17.5 -90 17 0.3
-18.5 -90 19.5 0.3
-21 -93.5 19.5 0.3
-22 -95 18 0.3
-23.5 -97.5 18 0.3
-25.5 -101 18 0.3
-27.5 -103.5 18 0.3
-28 -109 17 0.3
-27.5 -111.5 17 0.3
-29 -115 16.5 0.3
-30 -119 16.5 0.3
-31 -122 16.5 0.3
-32.5 -123.5 16.5 0.3
-36 -127.5 16.5 0.3
-39.5 -131 13 0.3
-40 -133.5 16 0.2
-42 -134.5 16 0.2
-45 -134.5 16 0.2
-46 -136.5 15.5 0.2
-48.5 -137 15.5 0.2
-50.5 -139.5 15.5 0.2
-55 -140 15.5 0.2
-58.5 -139.5 15.5 0.2
-63 -139 18.5 0.2
-66.5 -139 18.5 0.2
-69.5 -143 17 0.2
-72.5 -143 17 0.2
-75.5 -141 17.5 0.2
-78.5 -140 18 0.2
-81 -139.5 18 0.2
-81.5 -137 17.5 0.2
-85 -137 17.5 0.2
-86.5 -140 17 0.2
-86.5 -141 17 0.2
-88 -142 17 0.2
-90 -142.5 17 0.2
-92.5 -142 17 0.2
-93.5 -139 17.5 0.2
-93.5 -138 19 0.2
-92 -136.5 19 0.2
-91.5 -136.5 19 0.2
8 25
-6 -64.5 15 1
-8.5 -64.5 16.5 0.3
-12 -64 16 0.3
-16 -64 16 0.3
-18.5 -65 16 0.3
-20.5 -65 16.5 0.3
-25 -65.5 17 0.3
-27.5 -65 17 0.3
-33 -65 16 0.3
-35.5 -63.5 16 0.3
-39 -62.5 16 0.3
-41.5 -63.5 16 0.3
-43 -61.5 18 0.3
-45.5 -62 17.5 0.3
-48.5 -63 17.5 0.3
-50.5 -65 18 0.3
-52.5 -67.5 18 0.3
-54.5 -70 18 0.3
-56.5 -71 19 0.2
-58 -73 19 0.2
-61 -73.5 19 0.2
-64 -73.5 19 0.2
-64 -72 21 0.2
-65.5 -71 21 0.2
-66 -70 20 0.2
5 15
-3.5 -21.5 9 3.5
-5 -27.5 9 1.2
-6.5 -30.5 10 1.2
-8.5 -33.5 9.5 1.2
-9 -36 10 1.2
-10 -38 11.5 1.2
-11.5 -40.5 11.5 1.2
-12 -43.5 11.5 1.2
-14 -45.5 11 1.2
-16 -47.5 11 1
-18 -50.5 12 1
-18.5 -53.5 13.5 1
-21.5 -56.5 13.5 1
-23 -59 16 1
-24 -60.5 15.5 1.3
11 39
-24 -60.5 15.5 1.3
-25.5 -62.5 16.5 0.6
-24.5 -65.5 16 0.6
-25 -68 16 0.6
-25 -70.5 16 0.6
-23.5 -72.5 16 0.6
-21 -74 16 0.6
-19.5 -75.5 16 0.6
-18 -78 16 0.6
-15.5 -78 16 0.6
-13.5 -79 15.5 0.6
-13 -81.5 15.5 0.6
-15 -83.5 15.5 0.6
-16 -86 15.5 0.6
-16 -88.5 16.5 0.6
-14.5 -91.5 16.5 0.6
-15.5 -95 16.5 0.6
-14.5 -97 16 0.6
-13 -99.5 16 0.6
-13.5 -102.5 16 0.6
-13 -104.5 17 0.6
-13 -107.5 16.5 0.4
-10.5 -109.5 16.5 0.4
-12 -111.5 16.5 0.4
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3 12
-11 -149 15 0.3
-12 -151 14.5 0.2
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8 22
-12 -174.5 17 0.2
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-18 -181.5 17.5 0.2
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4 15
-12 -174.5 17 0.2
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-18.5 -175 16.5 0.2
-17 -177 16.5 0.2
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-24 -178 18.5 0.2
-26 -179.5 18.5 0.2
-27.5 -178 17 0.2
-29 -179.5 17.5 0.2
-33.5 -178 18 0.2
-35.5 -178.5 18 0.2
-34 -176.5 18 0.2
-34 -175 18 0.2
2 7
-11 -149 15 0.3
-11.5 -148.5 15.5 0.2
-13.5 -150 15.5 0.2
-15.5 -151.5 16.5 0.2
-13 -152.5 16 0.2
-15 -153 16 0.2
-15 -156 16 0.2
6 21
-24 -60.5 15.5 1.3
-26 -61.5 16.5 0.8
-28.5 -62 16.5 0.8
-30.5 -61.5 18.5 0.8
-31.5 -60.5 17.5 0.8
-32.5 -59.5 20 0.8
-34.5 -58 20.5 0.8
-38 -57 19 0.8
-40 -58 19 0.8
-42 -59 19 0.8
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-47 -60 18 0.8
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-52 -62 18 0.8
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-62.5 -69 17.5 0.8
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12 43
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1 4
-145.5 -77 19.5 0.3
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-149 -79.5 19 0.2
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-145.5 -77 19.5 0.3
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228 6 25 0.3
231.5 3.5 25 0.3
234 3.5 25 0.3
234.5 1.5 25 0.3
236 0 26.5 0.2
239.5 -2 26.5 0.2
242.5 0 26.5 0.2
245 -3 26.5 0.2
248 -6 26.5 0.2
249 -7.5 27.5 0.2
256.5 -6.5 26 0.2
255 -10 26 0.2
257.5 -10.5 27 0.2
259.5 -13.5 27 0.2
261.5 -15 27.5 0.1
262 -19 28 0.1
265.5 -21.5 28 0.1
266.5 -25.5 27 0.1
267 -28 27 0.1
271.5 -29 27 0.1
272 -30.5 27.5 0.1
274 -30.5 28 0.1
274.5 -34 28 0.1
278 -32 26 0.1
281.5 -34.5 26.5 0.1
281.5 -34.5 26.5 0.1
14 38
76.5 -44.5 23 1.3
77 -46.5 24 0.9
81 -47.5 24 0.7
83.5 -48 25.5 0.7
86.5 -46.5 26 0.7
89.5 -45.5 26 0.7
92.5 -44.5 26.5 0.7
95.5 -45.5 26 0.7
98 -45.5 26 0.7
102 -45 27.5 0.7
102.5 -47 27.5 0.7
107 -46.5 28.5 0.6
109.5 -46.5 28.5 0.6
112 -47 28 0.6
111.5 -48.5 29.5 0.4
114.5 -46.5 28.5 0.4
117.5 -45 28.5 0.4
120.5 -45 28 0.4
123 -45 30.5 0.3
127.5 -45.5 30.5 0.3
129 -48 30.5 0.3
130 -51.5 30 0.3
133 -50.5 30 0.3
130.5 -54 30 0.3
132 -58 32 0.3
134.5 -58.5 32 0.3
137.5 -57.5 32 0.3
142 -61 32 0.3
144.5 -64.5 32 0.3
148 -65 32 0.3
151.5 -66 32 0.3
151 -69.5 30.5 0.3
151 -73.5 30.5 0.3
157.5 -72.5 31 0.3
158 -78 31 0.3
161 -79.5 31 0.3
163 -83 31 0.3
171.5 -82.5 30.5 0.3
8 22
68.5 -44.5 21 1.6
68 -46 21 0.5
67 -49 21 0.5
66 -51 20.5 0.5
65.5 -53.5 20.5 0.4
64.5 -57 21 0.4
65.5 -60 20.5 0.4
66 -63 22 0.4
64.5 -66.5 22 0.3
65 -69.5 24 0.3
65.5 -72 24 0.3
65.5 -77 25 0.3
63 -81.5 25 0.3
62.5 -85 25 0.3
62.5 -88 25 0.3
59 -88 25.5 0.3
54.5 -88 25.5 0.3
52 -90 25.5 0.3
51.5 -95 25.5 0.3
50 -98 25.5 0.3
45 -98 25.5 0.3
43 -97.5 26 0.3
CONNECTIONS:
0 1
1 1
2 1
2 1
4 1
5 1
5 1
4 1
1 1
9 1
9 1
0 1
12 1
13 1
14 1
14 1
13 1
12 1
18 1
18 1
20 1
21 1
21 1
20 1
0 1
1 1
2 1
3 1
3 1
5 1
5 1
2 1
1 1
0 1
10 1
11 1
11 1
10 1
14 1
15 1
15 1
14 1
0 1
1 1
2 1
2 1
1 1
0 1
6 1
6 1
8 1
9 1
9 1
8 1
/*----------------------------------------------------------------*/
proc geometry() {
/* NULL geometry procedure: keeps the user from
calling the geometry procedure in isolation. */
printf("\nYou must re-read the entire geometry\n")
printf("file to execute geometry().\n\n")
}