/*----------------------------------------------------------------
%W% %G%
ctt3219c.asc translated Tue Dec 17 10:29:42 1996 by ntscable 2.0
source file syntax: Eutectic
output file syntax: CABLE
soma: diameter = 7.43375 um length = 12.747 um area = 297.692 um2
9 three-D points; 11 outline points numbered 1-11
outline diameter = 10.1867 um
5 primary neurites
30 branches totaling 2099.39 um in length, 1828.24 um2 in area
465 tree points translated to 240 segments (1 requested)
Neurites divided into segments of equal dx between adjacent digitized
branch points.
Segment length constrained to be < 10 um.
No. points 476
No. trees 6
Text T03219CO,HRP with silver enhancement, 4-3-89.
----------------------------------------------------------------*/
/* create sections */
create soma,\
dend1[11],\
dend2[25],\
dend3[1],\
dend4[7],\
dend5[11]
/*----------------------------------------------------------------*/
proc geometry() { local i, j
/* soma geometry */
soma {
nseg = 1
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
/* connect primary neurites */
soma connect dend1[0] (0), 0.5
soma connect dend2[0] (0), 0.5
soma connect dend3[0] (0), 0.5
soma connect dend4[0] (0), 0.5
soma connect dend5[0] (0), 0.5
/* neurite geometry*/
for i = 0,10 {
dend1[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,24 {
dend2[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,0 {
dend3[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,6 {
dend4[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,10 {
dend5[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
/* branching topology*/
for i = 1,10 {
dend1[fscan()] connect dend1[i] (0), fscan()
}
for i = 1,24 {
dend2[fscan()] connect dend2[i] (0), fscan()
}
for i = 1,0 {
dend3[fscan()] connect dend3[i] (0), fscan()
}
for i = 1,6 {
dend4[fscan()] connect dend4[i] (0), fscan()
}
for i = 1,10 {
dend5[fscan()] connect dend5[i] (0), fscan()
}
}
geometry()
SOMA COORDINATES AND DIAMETERS:
9
-5.5 4 -2 0
-5.5 2.5 -2 3
-4.5 2.5 -2 7
-3 1.75 -2 8.5
-1 0.75 -2 10.5
-0.5 0.35714 -2 10.714
2.5 -0.71429 -2 9.4286
3 -1.5 -2 8
4.5 -2 -2 0
NEURITE COORDINATES AND DIAMETERS:
1 3
4 -4.5 0.5 2.4
5.5 -4.5 -4.5 2.4
6 -4.5 -4 2
1 3
6 -4.5 -4 2
8 -3 -3.5 1.7
9.5 -1.5 -4 1.7
5 20
9.5 -1.5 -4 1.7
11 -1 -4 1.4
13.5 -1.5 -4 1.2
15.5 -2.5 -4 1
16 -4.5 -5.5 1
20 -5.5 -4.5 1
22.5 -7 -4 0.8
24 -8.5 -4.5 0.8
25.5 -8 -5 0.6
27.5 -9 -5 0.6
28.5 -10 -5.5 0.6
31 -10 -5.5 0.6
33 -12 -4 0.5
34.5 -12 -4 0.5
35 -11 -3 0.3
35 -10 -4 0.1
34 -8 -4.5 0.1
35 -7 -3 0.1
37 -6.5 -4 0.1
38 -6 -4 0.1
6 22
9.5 -1.5 -4 1.7
9 2 -4 0.2
8 5 -4 0.2
7.5 6.5 -4 0.2
6 10.5 -4 0.2
5 13 -4 0.2
3 16 -4 0.2
2.5 18 -4.5 0.2
4 20.5 -4.5 0.2
5 22 -5 0.2
5 25 -5 0.2
5 28 -5 0.2
3.5 30.5 -5 0.2
3.5 32.5 -3.5 0.2
3.5 35 -3.5 0.2
3 37 -3.5 0.2
1.5 40 -4 0.2
0.5 41.5 -4 0.2
0.5 43.5 -4 0.2
-1 45.5 -4 0.2
0 47 -4 0.2
-0.5 47.5 -2 0.2
2 6
-0.5 47.5 -2 0.2
2 50 -3 0.1
4 51.5 -3 0.1
8 54 -3 0.1
11 56.5 -2.5 0.1
11.5 58.5 -6 0.1
1 4
-0.5 47.5 -2 0.2
-2 49 -5.5 0.1
-2 51.5 -4 0.1
-2 53 -5.5 0.1
1 2
-2 53 -5.5 0.1
-5 55 -3.5 0.1
2 8
-2 53 -5.5 0.1
-1.5 55 -4.5 0.1
-1 56.5 -3.5 0.1
-1 58.5 -3.5 0.1
1 60 -5.5 0.1
2 62 -5.5 0.1
4.5 62.5 -5.5 0.1
4.5 64 -5.5 0.1
5 13
6 -4.5 -4 2
8.5 -7.5 -5.5 0.2
10.5 -9.5 -5.5 0.2
13 -11.5 -5.5 0.2
16 -14.5 -5 0.2
19 -17.5 -5 0.2
20.5 -21.5 -5.5 0.2
24 -24.5 -5.5 0.2
27 -27 -6 0.2
29 -30 -4 0.2
32 -36 -4.5 0.2
33.5 -40 -4 0.2
34.5 -42 -3.5 0.2
5 10
34.5 -42 -3.5 0.2
36 -43 -3.5 0.1
38.5 -45 -3.5 0.1
40 -48 -3.5 0.1
41 -51 -3.5 0.1
44.5 -54.5 -3.5 0.1
47 -62 -3.5 0.1
51 -68.5 -1.5 0.1
54 -72.5 1 0.1
56.5 -78 0 0.1
4 10
34.5 -42 -3.5 0.2
34.5 -46 -3 0.1
34 -50.5 -3 0.1
35 -52.5 -3 0.1
35 -56 -3 0.1
35 -59.5 -3 0.1
36.5 -66.5 -2 0.1
38.5 -71.5 -2 0.1
40 -74.5 -3 0.1
40 -74.5 -3 0.1
2 6
-0.5 -4.5 0 1.1
-1.5 -5.5 -4 1.1
-3 -5.5 -7 1.1
-4.5 -5.5 -7.5 1.1
-6.5 -7 -7.5 1.1
-6.5 -7 -7.5 1.1
4 11
-6.5 -7 -7.5 1.1
-5 -12 -8 0.2
-4 -16 -7.5 0.2
-3 -19.5 -8 0.2
0 -24.5 -7 0.2
3.5 -28.5 -7.5 0.2
5 -31 -7.5 0.2
7 -32.5 -7.5 0.2
9 -35.5 -7.5 0.2
10.5 -38 -7.5 0.2
11.5 -40 -7.5 0.2
1 4
11.5 -40 -7.5 0.2
12.5 -43 -7.5 0.1
14 -46.5 -7.5 0.1
15 -47.5 -7.5 0.1
2 4
11.5 -40 -7.5 0.2
13.5 -41.5 -7.5 0.2
15.5 -46.5 -8 0.2
16.5 -49 -7.5 0.2
2 5
16.5 -49 -7.5 0.2
19 -52.5 -7 0.1
21.5 -58 -7 0.1
23 -61.5 -6 0.1
24.5 -63.5 -8 0.1
3 5
16.5 -49 -7.5 0.2
18.5 -51 -8 0.2
21.5 -57 -6.5 0.2
25.5 -68 -6.5 0.2
27 -69 -4.5 0.2
1 2
27 -69 -4.5 0.2
28.5 -74.5 -5 0.2
1 3
28.5 -74.5 -5 0.2
31.5 -78 -4 0.1
33 -79 -3.5 0.1
9 25
28.5 -74.5 -5 0.2
28.5 -79 -3 0.2
28.5 -81.5 -3 0.2
28.5 -85 -3 0.2
32.5 -91 -2.5 0.2
35 -93 -3 0.2
36.5 -97 -3 0.2
39.5 -99.5 -3 0.2
41.5 -104 -3.5 0.2
42.5 -106 -4 0.2
43.5 -107 -4 0.2
44.5 -109 -2 0.2
46 -110.5 -2 0.2
47 -114 -2 0.2
50 -116 -2 0.2
50 -117.5 -2 0.2
51 -118.5 -2 0.2
51 -121 -0.5 0.2
53 -123.5 -0.5 0.2
53 -126.5 -0.5 0.2
54 -131.5 1.5 0.2
54.5 -136 0.5 0.2
55.5 -139.5 0.5 0.2
55 -146 0 0.2
55 -146 0 0.2
9 14
27 -69 -4.5 0.2
30.5 -73.5 -4.5 0.2
33 -78.5 -4.5 0.2
35 -83.5 -4.5 0.2
38.5 -87 -3 0.2
44.5 -92.5 -3 0.2
48.5 -96.5 -3 0.2
53.5 -100.5 -2.5 0.2
58 -105.5 0 0.2
62.5 -111.5 0 0.2
64.5 -116.5 2 0.2
67.5 -122 1.5 0.2
73.5 -132.5 1 0.2
73.5 -132.5 1 0.2
2 6
-6.5 -7 -7.5 1.1
-8.5 -8 -6 1.1
-11 -8 -6.5 1.1
-12.5 -11 -6.5 1.1
-14 -13.5 -4.5 0.8
-14 -16 -5 0.8
3 10
-14 -16 -5 0.8
-16.5 -17 -4.5 0.6
-18 -19.5 -4.5 0.6
-19.5 -21.5 -4.5 0.6
-20.5 -23.5 -4.5 0.6
-22 -26 -4.5 0.6
-23 -27.5 -4.5 0.6
-23.5 -30.5 -3.5 0.6
-23 -32 -3.5 1
-24 -33.5 -4.5 1
6 11
-24 -33.5 -4.5 1
-22.5 -38 -4 0.2
-20 -45 -4 0.2
-16.5 -52 -3 0.2
-14.5 -55.5 -3 0.2
-12 -59 -3 0.2
-9.5 -62 -3 0.2
-7.5 -64 -3 0.2
-6.5 -68 -3 0.2
-3 -74.5 -3 0.2
-0.5 -78.5 -2.5 0.2
2 4
-0.5 -78.5 -2.5 0.2
0 -83.5 -2 0.1
1.5 -88.5 -2.5 0.1
1.5 -88.5 -2.5 0.1
13 19
-0.5 -78.5 -2.5 0.2
2 -81 -2.5 0.1
6 -87 -2.5 0.1
10.5 -96 -3.5 0.1
16 -102.5 -1.5 0.1
23 -110.5 -1 0.1
29 -116 -1 0.1
35 -122 1 0.1
40 -128 1 0.1
45 -135 1 0.1
50.5 -140.5 1.5 0.1
52 -142.5 1.5 0.1
57 -149.5 1.5 0.1
60.5 -156.5 2 0.1
63.5 -160.5 2 0.1
67.5 -165.5 2 0.1
71 -170 1.5 0.1
72.5 -169.5 2 0.1
76.5 -174 -0.5 0.1
3 5
76.5 -174 -0.5 0.1
76.5 -180 0.5 0.1
73.5 -184 -0.5 0.1
70.5 -189.5 -0.5 0.1
70.5 -193.5 -4.5 0.1
6 11
76.5 -174 -0.5 0.1
82 -180.5 -1 0.1
85 -184 1.5 0.1
90 -188 2 0.1
94 -195.5 -1.5 0.1
95.5 -199 -1.5 0.1
96 -206.5 -1 0.1
95.5 -210 -1.5 0.1
93 -215 -2 0.1
93 -220 -2 0.1
93 -224.5 -1 0.1
2 4
-24 -33.5 -4.5 1
-29 -33.5 -5 0.1
-36.5 -41.5 -5 0.1
-36.5 -41.5 -5 0.1
1 3
-14 -16 -5 0.8
-9.5 -22 -3.5 0.1
-9.5 -22 -3.5 0.1
2 4
-9.5 -22 -3.5 0.1
-11 -25 -4 0.1
-13 -29.5 -5 0.1
-14 -33 -4 0.1
4 4
-9.5 -22 -3.5 0.1
-3.5 -29.5 -3.5 0.1
-0.5 -35.5 -4 0.1
6 -47.5 -2.5 0.1
2 3
6 -47.5 -2.5 0.1
8.5 -53.5 -4 0.1
11 -55.5 -2 0.1
16 25
6 -47.5 -2.5 0.1
7 -55.5 -3.5 0.1
11 -64 -1.5 0.1
14.5 -67.5 -1.5 0.1
18 -75 -0.5 0.1
21.5 -82.5 0 0.1
23 -87 0 0.1
25 -92.5 -0.5 0.1
23.5 -99.5 0.5 0.1
21 -102.5 0.5 0.1
21 -106 -0.5 0.1
17 -110.5 -1 0.1
17.5 -118.5 -1.5 0.1
18 -121 -0.5 0.1
17 -124 0 0.1
19.5 -131 -1 0.1
22.5 -135 -1 0.1
28 -137.5 -1 0.1
31.5 -146.5 -0.5 0.1
32.5 -153.5 -0.5 0.1
33.5 -158 -2.5 0.1
36 -164 -3.5 0.1
39.5 -174.5 -1.5 0.1
41.5 -182 -3.5 0.1
44 -184.5 -3 0.1
2 3
44 -184.5 -3 0.1
43 -190.5 -3 0.1
43.5 -195 -3 0.1
7 9
44 -184.5 -3 0.1
47.5 -193.5 -3.5 0.1
51.5 -203 -4 0.1
53.5 -211 -3 0.1
55.5 -216.5 -4.5 0.1
59.5 -225.5 -4.5 0.1
64.5 -231.5 -7 0.1
69.5 -239 -7 0.1
69.5 -239 -7 0.1
28 45
-5.5 3 -0.5 1.8
-8 3 -3 1.2
-11.5 5.5 -3 0.6
-17.5 10.5 -4 0.6
-23.5 16 -5 0.6
-27.5 21 -5.5 0.6
-34 28.5 -5 0.4
-37.5 33 -4 0.4
-39.5 37.5 -4.5 0.2
-41.5 42 -4.5 0.2
-44.5 49.5 -4.5 0.2
-46.5 53.5 -4 0.2
-49 60 -4.5 0.2
-51.5 66 -4.5 0.2
-53.5 69.5 -4.5 0.2
-56 74.5 -3 0.3
-59 79.5 -3 0.3
-63.5 85.5 -3 0.3
-68 92.5 -3 0.3
-71 97.5 -2 0.2
-75 100 -3 0.2
-79 105 -3 0.2
-82 110 -3 0.2
-86 115 -4.5 0.2
-88 120 -3 0.2
-88 122 -3 0.2
-90 124.5 -4 0.2
-91.5 128 -4 0.2
-91.5 132 -3.5 0.2
-93.5 136.5 -3.5 0.2
-98.5 142.5 -3.5 0.2
-106 148 -6.5 0.2
-111 152 -4 0.2
-118 158.5 -2 0.2
-122.5 163.5 -2 0.2
-128 168.5 -2 0.2
-138 174.5 -2 0.2
-143.5 178 0 0.2
-148 183 0.5 0.2
-154.5 185.5 1.5 0.2
-160 190 1.5 0.2
-164.5 196.5 1 0.2
-166.5 202 0.5 0.2
-165.5 206 1 0.2
-165.5 210 1.5 0.2
5 9
-4 4.5 -2 1.8
-6.5 8 -3 1.8
-9 16.5 -4 1.8
-14.5 25 -3.5 1.8
-15.5 30.5 -4 1.4
-21 36.5 -3 1.4
-22.5 41 -4.5 1.2
-24.5 43 -4.5 1.2
-25.5 46.5 -5.5 1.2
7 17
-25.5 46.5 -5.5 1.2
-28 51 -4.5 0.9
-30 53 -5 0.9
-30.5 55.5 -5 0.9
-31.5 57.5 -5 0.9
-32 60.5 -5 0.9
-34.5 64.5 -6.5 0.9
-34.5 68.5 -5.5 0.9
-39.5 74.5 -5.5 0.9
-41 79.5 -5 0.9
-42.5 84.5 -5 0.9
-43 88 -5 0.9
-46 89 -5 0.9
-47.5 93.5 -5 0.9
-52 96.5 -5 0.9
-55 99 -5 0.9
-56.5 101 -4.5 0.9
8 22
-56.5 101 -4.5 0.9
-58.5 104 -6 0.7
-58.5 105.5 -8.5 0.7
-61.5 107.5 -10 0.7
-62.5 109.5 -10.5 0.7
-65.5 110.5 -9 0.7
-67 114.5 -9 0.7
-69.5 115.5 -9 0.7
-71 118 -7.5 0.7
-73 119.5 -8 0.7
-74.5 124.5 -8 0.7
-76.5 125.5 -8 0.7
-77.5 129 -7.5 0.7
-80.5 130.5 -7.5 0.7
-80.5 134 -8.5 0.7
-81.5 137.5 -8 0.7
-85.5 138.5 -9.5 0.7
-88.5 144.5 -8 0.7
-90.5 147 -8 0.7
-90.5 149.5 -8 0.7
-94.5 152 -8 0.7
-93 156 -7.5 0.1
8 18
-56.5 101 -4.5 0.9
-57 100.5 -4.5 0.1
-59 102 -4.5 0.1
-61.5 100.5 -4.5 0.1
-63 101.5 -4.5 0.1
-66 97.5 -2 0.1
-68 97.5 -3 0.1
-69 95.5 -1.5 0.1
-73.5 95 -1.5 0.1
-73.5 93 -2 0.1
-75 92.5 -1 0.1
-77.5 91.5 0 0.1
-82 91 0 0.1
-84 95 -1.5 0.1
-91.5 104 -1.5 0.1
-96 111 -1.5 0.1
-102.5 119 -1.5 0.1
-107 125 0 0.1
2 4
-107 125 0 0.1
-108.5 129 -1 0.1
-108.5 133 -3 0.1
-106.5 134.5 -3 0.1
5 14
-107 125 0 0.1
-111 125 -0.5 0.1
-113 122.5 -0.5 0.1
-114.5 122.5 -0.5 0.1
-117 116.5 1 0.1
-118.5 115 1 0.1
-117.5 113 1 0.1
-119 109 0 0.1
-121 108 0.5 0.1
-121 102 1.5 0.1
-121 97 -1 0.1
-122.5 93 -2.5 0.1
-122.5 87.5 -3.5 0.1
-122.5 87.5 -3.5 0.1
4 18
-25.5 46.5 -5.5 1.2
-24.5 49 -3 0.3
-21.5 50 -4.5 0.3
-21.5 52 -4.5 0.3
-19.5 52.5 -4.5 0.3
-18 55 -4.5 0.3
-17 55.5 -4.5 0.3
-15 55.5 -4.5 0.3
-14.5 59 -4 0.3
-12.5 59.5 -4.5 0.3
-11.5 61.5 -4.5 0.2
-10 63 -4.5 0.2
-9.5 65 -4.5 0.2
-11.5 63.5 -4.5 0.2
-12 64.5 -4.5 0.2
-11.5 67 -4 0.2
-11.5 68.5 -3.5 0.2
-11.5 68.5 -3.5 0.2
6 10
-13 -7 -5 0.2
-15 -2.5 -4 0.1
-21 4 -5 0.1
-28 9 -5 0.1
-30.5 13.5 -3.5 0.1
-35.5 18.5 -2 0.1
-42 24.5 -4 0.1
-45.5 28 -1.5 0.1
-51.5 32.5 -1.5 0.1
-52.5 33.5 -2 0.1
2 3
-52.5 33.5 -2 0.1
-57 37 -2 0.1
-61 39 -3 0.1
1 2
-52.5 33.5 -2 0.1
-55 33 -2 0.1
8 14
-55 33 -2 0.1
-55 36 -2 0.1
-57 45 -2 0.1
-59 50.5 -2 0.1
-62 56 -2 0.1
-66 58.5 -2 0.1
-69.5 60 -2 0.1
-72 64 -2.5 0.1
-75.5 70.5 -1 0.1
-76.5 75 -1 0.1
-80 80 -1 0.1
-80 82 -1 0.1
-86 86.5 -1.5 0.1
-89 91 -2 0.1
1 3
-55 33 -2 0.1
-57.5 33.5 -2 0.1
-60 35 -3 0.1
1 4
-60 35 -3 0.1
-62 37.5 -3 0.1
-65.5 40 -3 0.1
-66 40.5 -2.5 0.1
1 3
-60 35 -3 0.1
-62.5 35.5 -2 0.1
-63.5 36.5 -2 0.1
3 6
-63.5 36.5 -2 0.1
-68 38.5 -2.5 0.1
-72 42 -2 0.1
-77 45.5 -2.5 0.1
-79.5 48.5 -4.5 0.1
-81.5 49 -4.5 0.1
2 5
-63.5 36.5 -2 0.1
-65 38.5 -2 0.1
-68 43 -1.5 0.1
-72.5 47 -2.5 0.1
-72.5 47 -2.5 0.1
1 2
-72.5 47 -2.5 0.1
-72.5 49.5 -2.5 0.1
8 15
-72.5 47 -2.5 0.1
-75 46.5 -2.5 0.1
-79.5 49.5 -3 0.1
-82.5 52.5 -3 0.1
-85 57.5 -3 0.1
-89.5 63 -3 0.1
-93.5 70 -3.5 0.1
-96.5 73 -3.5 0.1
-99.5 78 -3 0.1
-106 85 -3 0.1
-109.5 88.5 -2.5 0.1
-113 93 -0.5 0.1
-118 97 -2.5 0.1
-121 101 -1.5 0.1
-122.5 103 -0.5 0.1
CONNECTIONS:
0 1
1 1
1 1
3 1
3 1
5 1
5 1
0 1
8 1
8 1
0 1
1 1
1 1
3 1
3 1
5 1
6 1
6 1
5 1
0 1
10 1
11 1
12 1
12 1
14 1
14 1
11 1
10 1
18 1
18 1
20 1
20 1
22 1
22 1
0 1
1 1
1 1
3 1
3 1
0 1
0 1
0 1
2 1
2 1
4 1
4 1
6 1
6 1
8 1
8 1
/*----------------------------------------------------------------*/
proc geometry() {
/* NULL geometry procedure: keeps the user from
calling the geometry procedure in isolation. */
printf("\nYou must re-read the entire geometry\n")
printf("file to execute geometry().\n\n")
}