/*----------------------------------------------------------------
%W% %G%
ctty118f.asc translated Tue Dec 17 10:29:47 1996 by ntscable 2.0
source file syntax: Eutectic
output file syntax: CABLE
soma: diameter = 13.2256 um length = 21.8083 um area = 906.122 um2
17 three-D points; 20 outline points numbered 1-20
outline diameter = 18.2601 um
5 primary neurites
21 branches totaling 1143.72 um in length, 1946.18 um2 in area
366 tree points translated to 133 segments (1 requested)
Neurites divided into segments of equal dx between adjacent digitized
branch points.
Segment length constrained to be < 10 um.
No. points 386
No. trees 6
Text T11118FO, HRP and DAB, 2/3/89
----------------------------------------------------------------*/
/* create sections */
create soma,\
dend1[1],\
dend2[5],\
dend3[1],\
dend4[25],\
dend5[5]
/*----------------------------------------------------------------*/
proc geometry() { local i, j
/* soma geometry */
soma {
nseg = 1
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
/* connect primary neurites */
soma connect dend1[0] (0), 0.5
soma connect dend2[0] (0), 0.5
soma connect dend3[0] (0), 0.5
soma connect dend4[0] (0), 0.5
soma connect dend5[0] (0), 0.5
/* neurite geometry*/
for i = 0,0 {
dend1[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,4 {
dend2[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,0 {
dend3[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,24 {
dend4[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
for i = 0,4 {
dend5[i] {
nseg = fscan()
pt3dclear()
for j = 1, fscan() {
pt3dadd(fscan(),fscan(),fscan(),fscan())
}
}
}
/* branching topology*/
for i = 1,0 {
dend1[fscan()] connect dend1[i] (0), fscan()
}
for i = 1,4 {
dend2[fscan()] connect dend2[i] (0), fscan()
}
for i = 1,0 {
dend3[fscan()] connect dend3[i] (0), fscan()
}
for i = 1,24 {
dend4[fscan()] connect dend4[i] (0), fscan()
}
for i = 1,4 {
dend5[fscan()] connect dend5[i] (0), fscan()
}
}
geometry()
SOMA COORDINATES AND DIAMETERS:
17
-9 2 -1 0
-8.5 1 -1 5
-7.5 1.625 -1 9.75
-6.5 1.375 -1 12.75
-5.5 1 -1 16
-5 0.53571 -1 17.071
-3.5 -0.35714 -1 19.286
-2 -0.25 -1 19.5
-1 -0.4 -1 19.2
2.5 -0.425 -1 17.15
3 -0.375 -1 16.75
5.5 -0.46429 -1 14.071
6.5 1.25 -1 9.5
7 0.875 -1 8.25
7.5 0.9375 -1 7.875
9 1.75 -1 5.5
10 2 -0.5 0
NEURITE COORDINATES AND DIAMETERS:
3 8
-6 -4.5 -0.5 0.2
-7 -7 -3.5 0.3
-8 -9 -3 0.2
-11.5 -10 -2 0.2
-15.5 -10 -2 0.2
-18.5 -8 -3 0.2
-19.5 -4.5 -1.5 0.2
-19 -3 -1.5 0.2
1 5
-6.5 -2 -0.5 4.7
-7 -3.5 3 4.7
-8 -4 5 3.1
-9.5 -5 4 2
-10.5 -5 4 1.1
10 42
-10.5 -5 4 1.1
-12.5 -4.5 4 0.7
-14 -4.5 5.5 0.7
-13.5 -5.5 8 0.7
-13.5 -7.5 9.5 0.5
-15 -8.5 8 0.5
-17 -10 8.5 0.5
-17.5 -13 8.5 0.5
-17.5 -15 10.5 0.5
-17.5 -17.5 9.5 0.5
-18.5 -21.5 9.5 0.5
-20 -23 8 0.5
-22 -25 9.5 0.5
-20 -26.5 11.5 0.5
-20.5 -28 12 0.5
-22 -28 12.5 0.5
-24 -27.5 13 0.5
-25.5 -28 11.5 0.5
-26 -28.5 12 0.4
-25 -29 13 0.4
-23 -28.5 13 0.4
-21.5 -28.5 14.5 0.4
-21 -28.5 16 0.4
-22.5 -29.5 16 0.4
-24.5 -28.5 18.5 0.4
-26 -29.5 19.5 0.4
-26.5 -32.5 19.5 0.4
-29 -34.5 20.5 0.4
-29.5 -35 20 0.4
-27 -36 21 0.3
-26 -37 21 0.3
-28.5 -37.5 21.5 0.3
-30.5 -37.5 20.5 0.3
-30.5 -37.5 22.5 0.1
-31.5 -39 22 0.1
-29.5 -40 22 0.1
-28 -39.5 24.5 0.1
-28.5 -41 24.5 0.1
-30 -41.5 24.5 0.1
-32 -42.5 25 0.1
-35 -42.5 24.5 0.1
-35.5 -43.5 24.5 0.1
2 6
-10.5 -5 4 1.1
-12.5 -5.5 7 0.4
-15 -7 6.5 0.4
-15 -9 5.5 0.4
-15.5 -10.5 7 0.4
-15.5 -10.5 8.5 0.4
1 4
-15.5 -10.5 8.5 0.4
-13.5 -12.5 8.5 0.1
-13 -15 8 0.1
-13 -15 8 0.1
18 58
-15.5 -10.5 8.5 0.4
-17.5 -9 10 0.4
-19.5 -9 10.5 1
-21 -10 9.5 0.3
-22.5 -12 10 0.3
-21.5 -11.5 10.5 0.3
-20.5 -9.5 12.5 0.3
-22 -9 12.5 0.3
-24.5 -10 13.5 0.3
-25.5 -9.5 15 0.3
-25.5 -9 16.5 0.3
-25.5 -8 17.5 0.3
-28 -8 17 0.3
-29.5 -7.5 18 0.3
-29.5 -9 20 0.3
-31 -9.5 21 0.3
-32 -7.5 21 0.3
-32.5 -5.5 23 0.3
-33.5 -4.5 24 0.3
-36.5 -3.5 25.5 0.3
-38.5 -1.5 26.5 0.3
-41.5 -1.5 28.5 0.3
-44 -4.5 27.5 0.3
-45.5 -5.5 27.5 0.1
-50 -6.5 28 0.1
-55.5 -5.5 29 0.1
-62 -5 29 0.1
-67 -5.5 29 1.5
-70 -5.5 29 0.3
-72 -6 29.5 0.3
-75.5 -6.5 29.5 0.3
-75.5 -6.5 29.5 0.9
-78 -7 29.5 1.1
-80 -7 32 0.1
-83.5 -7.5 31 0.1
-87 -8 31 0.1
-93 -8 31.5 0.1
-99 -10 32.5 0.1
-99.5 -10 34 0.9
-103 -10.5 33.5 0.1
-106.5 -11 34 0.1
-110.5 -12.5 34 0.9
-113.5 -12.5 33.5 0.1
-117 -13 33.5 0.6
-120 -13 34.5 1.6
-123.5 -13.5 35.5 0.1
-125.5 -12.5 34 0.1
-127.5 -12 34 0.1
-131 -11.5 34.5 0.1
-133 -12.5 33 0.8
-137.5 -13 31 1.3
-139.5 -14 32.5 0.6
-143 -14.5 32 0.6
-146.5 -16 33.5 0.1
-149 -18.5 33.5 0.1
-152 -20.5 34 0.1
-153 -23.5 35.5 0.1
-153 -23.5 35.5 0.1
3 9
-7.5 2 -4.5 0.1
-8.5 5 -4 0.1
-10 8 -3.5 0.1
-12 9.5 -1.5 0.1
-14 10 0 0.1
-15.5 10 2 0.1
-17.5 7.5 3.5 0.1
-19.5 5 4.5 0.1
-21.5 -1 3 0.1
1 3
-4.5 6 -0.5 4.7
-4.5 6 5.5 3.6
-4.5 6 9 3.6
2 4
-4.5 6 9 3.6
-3 9 8 2.3
-0.5 11 7.5 3.4
3 14.5 8 2
11 36
3 14.5 8 2
6.5 13.5 7 1.5
10.5 14 8 1.5
15.5 17 8.5 1.5
19 17.5 6 1.5
23 19 9 1.5
26 19.5 8.5 1.3
28 19.5 10 1.3
32 22 12.5 1.3
34 23.5 12 1.3
31.5 25 13 0.7
31.5 27 13 0.7
34.5 26.5 13 0.7
35 24.5 13.5 0.7
36 25 15 0.7
36.5 26.5 16.5 0.7
38 28.5 16.5 0.7
36.5 30.5 17 0.7
36.5 32.5 19 0.4
39.5 35 18 0.4
39.5 36 18.5 0.4
37.5 37.5 19 0.4
36.5 38.5 19 0.4
37.5 40.5 19.5 0.4
39 40.5 19.5 0.4
40.5 42.5 21 0.4
40.5 44 19 0.4
40.5 48 20.5 0.2
41.5 51 21 0.2
40.5 52 21.5 0.2
42.5 54 21.5 0.2
41.5 58 22.5 0.2
41 59.5 25 0.2
40 60.5 28.5 0.2
36 60 30 0.1
33.5 59.5 30.5 0.1
3 9
3 14.5 8 2
0.5 18 9 0.5
-0.5 20.5 10.5 0.5
-4 21.5 11 0.5
-6.5 23.5 11 0.5
-8.5 28 11.5 1
-9 30 12 1
-11 32 10.5 1
-12.5 35.5 12 1
1 4
-12.5 35.5 12 1
-12.5 39 12.5 0.5
-12 41 11.5 0.5
-12 41 11.5 0.5
1 3
-12 41 11.5 0.5
-14.5 39.5 11.5 0.1
-14.5 39.5 11.5 0.1
1 5
-12 41 11.5 0.5
-12 43.5 12.5 0.5
-13 45 12.5 0.6
-14.5 46 14 0.2
-14.5 46 14 0.2
2 8
-14.5 46 14 0.2
-13 48 14.5 0.2
-12 49.5 16.5 0.2
-13 52 17 0.2
-11.5 53.5 16.5 0.2
-12 55 15 0.2
-11.5 57 17 0.2
-10.5 58 17 0.2
3 9
-10.5 58 17 0.2
-7.5 58.5 17 0.2
-5.5 58 18.5 0.2
-3.5 55 19.5 0.2
-1 52.5 18 0.2
2 53.5 16.5 0.2
3.5 51.5 17 0.2
5 55 17 0.2
5 55 17 0.2
1 4
-10.5 58 17 0.2
-11.5 61 18.5 0.2
-14 61.5 19 0.2
-14 61.5 19 0.2
5 15
-14.5 46 14 0.2
-15.5 44.5 9 0.2
-17 46.5 10 0.2
-22 46 8.5 0.2
-26.5 46 7 0.2
-27 44.5 7.5 0.2
-30 45 5.5 0.7
-33.5 45 7.5 0.1
-35.5 44.5 8.5 0.1
-37.5 45 8 0.1
-41 46.5 9 0.1
-44 47 9.5 0.1
-47 48.5 9 0.1
-50 49.5 8.5 0.6
-49.5 49 7 0.6
1 3
-49.5 49 7 0.6
-53 48.5 7 0.1
-56 48.5 6.5 0.1
8 26
-49.5 49 7 0.6
-50 50.5 8 0.1
-52.5 52.5 8 0.1
-54.5 57.5 6 1.3
-57.5 61.5 7 1.3
-60.5 65.5 7.5 0.1
-62 66.5 7.5 0.1
-63.5 69.5 8 0.1
-64.5 72.5 8 0.1
-63 74.5 8 0.6
-64 76 8 0.1
-65 78 8 0.1
-66 80 8 0.1
-65.5 81.5 7.5 0.1
-67 82.5 7.5 0.5
-68 83.5 7.5 0.2
-68 86.5 9 2.5
-69 89 11 0.1
-68.5 90 10.5 0.1
-70.5 92.5 10.5 1
-72 94.5 10.5 0.1
-73 97 10 0.1
-76 99 6.5 0.1
-80.5 100 7.5 0.1
-85.5 98.5 9 0.1
-85.5 98.5 9 0.1
1 4
-12.5 35.5 12 1
-15 35 12.5 0.1
-18 36.5 13 0.1
-18 36.5 13 0.1
1 5
-18 36.5 13 0.1
-19.5 36 13.5 0.1
-21.5 34.5 13.5 0.1
-22 32.5 14 0.1
-24 29.5 14 0.1
1 2
-18 36.5 13 0.1
-19 36.5 13.5 0.1
2 6
-19 36.5 13.5 0.1
-20 38.5 13.5 0.1
-21.5 38 14 0.1
-25 39 14 0.1
-27 40.5 14 0.1
-27 40.5 14 0.1
9 25
-19 36.5 13.5 0.1
-20.5 36.5 13.5 0.1
-23 36 13.5 1.1
-26.5 31.5 11 0.1
-29 30 10 0.1
-30 30 10 1.1
-32 29.5 10.5 0.1
-34 27.5 9 0.1
-37.5 25.5 9.5 0.1
-40 22 9.5 0.1
-42.5 20.5 10 0.1
-43.5 18 10 0.1
-43.5 15 8.5 0.1
-44.5 11.5 8.5 0.1
-46 8.5 9 0.1
-48.5 4.5 10 0.1
-50 -0.5 12.5 0.1
-51 -5 11.5 0.1
-54 -11 11 0.1
-55 -13.5 11.5 0.1
-57.5 -15.5 11 1.4
-57 -18 11 0.1
-55.5 -23 10 0.1
-55.5 -27.5 10 0.1
-55.5 -27.5 10 0.1
1 5
-55.5 -27.5 10 0.1
-57.5 -30 9.5 0.1
-61 -30.5 8.5 0.1
-63 -29.5 8 0.1
-63 -29.5 8.5 0.1
1 3
-55.5 -27.5 10 0.1
-55 -31 12 0.1
-55 -32.5 12 0.1
6 16
-4.5 6 9 3.6
-9.5 7 10.5 0.9
-13.5 7 10.5 0.9
-16.5 8 10.5 0.9
-14.5 8 14 0.9
-17 7.5 16 0.5
-20 6 15 0.5
-20.5 6.5 15 1.2
-22 7.5 15 0.5
-21.5 11 16 0.5
-25 11.5 17.5 0.5
-28.5 13.5 18 0.5
-30 15 19 1.7
-32.5 17 20.5 0.7
-37 19.5 20 0.6
-42.5 22.5 19.5 0.5
2 4
-42.5 22.5 19.5 0.5
-49.5 22.5 22 0.1
-52.5 23.5 22 0.1
-55 26 24.5 0.1
3 8
-42.5 22.5 19.5 0.5
-46 25.5 21.5 0.1
-48 27 22.5 1.2
-48.5 29.5 22 0.1
-53.5 31.5 21.5 0.1
-56.5 33 24 0.1
-58.5 34 24 1.7
-58.5 34 24 0.1
2 4
-58.5 34 24 0.1
-61 31 26 0.1
-64.5 31 25 0.1
-67.5 31 25 0.1
1 4
-58.5 34 24 0.1
-61 35 25 0.1
-64.5 37.5 26.5 0.1
-64.5 37.5 26.5 0.1
11 16
35 24.5 13.5 0.1
39 23 9.5 1.1
43.5 23 7.5 1.1
46 21 5 0.6
48.5 19 4.5 0.6
51.5 16 5.5 0.1
56 11.5 6 0.1
58.5 9 6 0.6
65 4.5 5.5 0.6
83.5 -2.5 7.5 0.6
91 -3.5 7 0.6
99.5 -3 6.5 0.6
106 -2 7 1.4
113 -1 6.5 1.5
121.5 0.5 8.5 1.5
125.5 1.5 7.5 0.7
1 4
125.5 1.5 7.5 0.7
126 0 7.5 0.1
127 -2.5 7.5 0.1
127 -2.5 7.5 0.1
9 23
125.5 1.5 7.5 0.7
127.5 2.5 6.5 0.4
130 3.5 7 0.4
136.5 5 6.5 0.4
143 8 6 0.9
146.5 9.5 5.5 0.6
152.5 11.5 5.5 0.6
159.5 14 5.5 1.3
165.5 15 5 0.2
169 16.5 5 1.8
175.5 17 5 0.1
177.5 15.5 5 0.1
179.5 16 4.5 0.8
182 15.5 5.5 0.1
183.5 14.5 4.5 0.1
187.5 15 3.5 0.1
188.5 13 2 0.1
192.5 13 1.5 0.1
195.5 13.5 2.5 0.1
198 12.5 1.5 3.6
201 9 1 0.9
201.5 7 1 0.7
202.5 4.5 1 0.6
1 4
202.5 4.5 1 0.6
201 2.5 1.5 0.1
199.5 0.5 1.5 0.1
199.5 0.5 1.5 0.1
2 4
202.5 4.5 1 0.6
203.5 1.5 0.5 0.5
203.5 -2.5 2 0.1
203 -7.5 2 0.1
CONNECTIONS:
0 1
0 1
2 1
2 1
0 1
1 1
1 1
3 1
4 1
4 1
6 1
7 1
7 1
6 1
10 1
10 1
3 1
13 1
13 1
15 1
15 1
17 1
17 1
0 1
20 1
20 1
22 1
22 1
0 1
0 1
2 1
2 1
/*----------------------------------------------------------------*/
proc geometry() {
/* NULL geometry procedure: keeps the user from
calling the geometry procedure in isolation. */
printf("\nYou must re-read the entire geometry\n")
printf("file to execute geometry().\n\n")
}